Xanthomonas vasicola pv. vasculorum: C7V42_07175
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Entry
C7V42_07175 CDS
T05388
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
xva
Xanthomonas vasicola pv. vasculorum
Pathway
xva03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xva00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
C7V42_07175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xva03019
]
C7V42_07175
03009 Ribosome biogenesis [BR:
xva03009
]
C7V42_07175
03036 Chromosome and associated proteins [BR:
xva03036
]
C7V42_07175
Enzymes [BR:
xva01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
C7V42_07175
Messenger RNA biogenesis [BR:
xva03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C7V42_07175
Ribosome biogenesis [BR:
xva03009
]
Eukaryotic type
90S particles
RNase
C7V42_07175
Prokaryotic type
rRNA processing factors
C7V42_07175
Chromosome and associated proteins [BR:
xva03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
C7V42_07175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
AVQ06423
UniProt:
A0AAE8F9X8
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All DBs
Position
1556971..1557651
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AA seq
226 aa
AA seq
DB search
MSNRTFQRGDPIGHAFADPALLAQALRHRSAGTPHNERLEFLGDGIVNLLIAEALYQRWP
KADEGALTRARAELVREGALAVIGRTLNLGERLTLGPGELKSGGHRRDSILADAVEAIVA
AIYLDCGFERCRAVVLPWFEASLAALPVGKAEKDPKTRLQEWLQARQLPLPNYALISESG
DEHAKQFHVACILEQPTARAEGQGTSRRLAEQQAATLVIAQLDSNT
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaatagaaccttccagcgcggtgatccgatcgggcatgcatttgccgatccggct
ctgctcgcccaggcgctgcggcatcgcagcgccgggacgccgcataacgagcgactggaa
tttctcggcgacggcatcgtcaatctgttgatcgccgaagcgctgtatcaacgttggccc
aaggccgatgaaggcgcattgacccgcgcgcgtgccgaactcgtccgcgaaggtgcgctg
gcagtgatcggacgcacgttgaacctcggcgagcgtctgacgctgggtccaggcgagctg
aagtccggtggccatcggcgcgattcgatcctggccgatgcggtcgaagcgattgtcgcg
gccatttacctggactgcggtttcgagcgttgtcgtgcggtggtgctgccgtggttcgaa
gcctcgctggcggcgctgccggtgggcaaggccgaaaaagatcccaagacccggttgcag
gaatggctgcaggcgcgccaactgccgctgcctaattacgctctgatcagcgagagcggc
gacgaacatgccaagcagttccacgtcgcctgcattctggagcagcccactgcccgtgcc
gagggccagggcacctcgcgtcgtcttgccgagcaacaggcagcgactcttgtcatcgca
caactggattcaaacacgtga
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