Xanthomonas vasicola pv. vasculorum: C7V42_07640
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Entry
C7V42_07640 CDS
T05388
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
xva
Xanthomonas vasicola pv. vasculorum
Pathway
xva03030
DNA replication
xva03430
Mismatch repair
xva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C7V42_07640
03430 Mismatch repair
C7V42_07640
03440 Homologous recombination
C7V42_07640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xva03032
]
C7V42_07640
03400 DNA repair and recombination proteins [BR:
xva03400
]
C7V42_07640
Enzymes [BR:
xva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C7V42_07640
DNA replication proteins [BR:
xva03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C7V42_07640
DNA repair and recombination proteins [BR:
xva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C7V42_07640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AVQ06503
UniProt:
A0AAE8F793
LinkDB
All DBs
Position
complement(1641400..1644990)
Genome browser
AA seq
1196 aa
AA seq
DB search
MSTSRFVHLHVHTEFSLADSTIRVPEKPDQADPKKAKQANLLSRAVELDMPALAVTDLNN
LFALVKFYKAAEGVGIKPIAGADVMIATPDMTPWRMTLLCRDREGYLSLSRLLTRAWMEG
HRPEGGVAIHPEWLQAGHANLFALAGRDSLAGRLFSEGRADLAEQQLADWQRVFGDGLHL
ELTRTGRDGEERFNQFALNAAGVRGLPVAASNDVRFLYASDFNAHEARVCISSGRVLDDP
KRPRDYSDQQYMKSSEEMAALFADIPDAIDNTYALAQRCNIEMRLGTYFLPAYPVPEDET
LDSWIRSQSRDGLAARLEKSPLAPGKTRQDYVDRLEFELDTIIKMGFPGYFLIVADFIQW
GKNQGIPIGPGRGSGAGSLVAWALQITDLDPLPYNLLFERFLNPERVSMPDFDIDFCMDR
RDEVIDYVARKYGRERVSQIITYGTMAAKAVVRDAGRVLGFTYGLVDSVAKLIPNILGIT
LKDAMGEGKDSEMASPDLIQRYQVEDDVRDLMDLARQLEDLTRNAGKHAGGVVIAPEPLS
EFCPLFAEHDEDGRGKNPVTQFDKDDVEAVGLVKFDFLGLRTLTIIDWAVKAINVRHARA
GIDPVDITTIPLDDMPTYKGVFASGSTGAVFQFESSGMRRLLKDARPDRFEDLIALVSLY
RPGPMDLIPDFNARKHGQQEIVYPDPRTEAILKDTYGIMVYQEQVMQMAQIVGDYSLGGA
DLLRRAMGKKVPAEMAKHREIFREGAAKGGVSAAKADEIFDLMEKFAGYGFNKSHAAAYA
LVSYQTAWLKRHYPAEFMAATLSSDMDNTDKVVGFLDEVRNLGLTVKPPRVNESAYMFEA
ASPDTIQYGLGAIKGVGQGACEAIVEERQRGGPYTTLLDFCTRVGTAKLNRRTLEAMINA
GAMDGLGKNRASLMLQLPEVMKATEQMARERASGQNSLFGGPDPSAPAMRLDLPESKEWP
LGQLLTGERETLGFYLSGHPFDPHREEVRELVGCDLGALEKILASQQRGGGGGGGDGEKR
AWRPEVSAIVAGQVIGVRRKGDSQVFVQLEDGRGRVECSAFSDAMAEFGHLLTRDRILIV
KGGLREDEFNGGYSLRIRQCWDYEQICADHAQRLSLRLDLREKQAFRRIDALLAKHRPGK
TPLRLDLLLRAQSGGVAGMLDLNGSHSVRIDQQLMDSLRADPAVRTLKIKYNPPWA
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgtccacttcccgcttcgtccatctgcacgtccacaccgagttctcgctggcggattcc
accatccgtgtgcccgagaaaccggatcaggctgacccgaaaaaggccaagcaggccaac
ctgctgagccgggcagtcgaactcgacatgcccgcgctggcagtcactgacctcaacaac
ctgttcgcgctggtcaagttctacaaggccgccgaaggcgtcggcatcaagccgatcgcc
ggcgccgatgtgatgatcgccacgccggacatgacgccctggcgcatgaccctgctgtgc
cgcgaccgcgagggctacctgagcctgtcgcggctgctcacgcgggcctggatggaaggc
caccgccccgagggcggcgtggcgatccatccggaatggctgcaggccggccacgccaac
ctgtttgcgctggccggccgcgacagcctggccgggcggttgttcagcgaaggccgcgcc
gacctggccgagcagcaactggccgattggcagcgcgtgttcggcgatggcctgcatctg
gaactcacccgcaccggccgcgacggcgaagaacgcttcaaccagttcgccctcaacgca
gcaggcgtgcgcgggctgccggtggcggccagcaatgacgtgcgtttcctgtatgcaagc
gacttcaacgcgcacgaagcgcgcgtgtgcatttcctcgggccgcgtgctcgacgacccc
aagcgcccgcgcgactacagcgaccagcaatatatgaagtccagcgaggagatggcggcg
ctgttcgccgacatccccgacgcgatcgacaacacctacgcactggcgcaacgctgcaac
atcgagatgcgcctgggcacctacttcctgcccgcctacccggtgccggaagacgagacg
ctggacagctggatccgcagccagtcgcgcgacggtctggccgcacgtctggaaaagagc
ccgctcgcgcccggcaagacgcgccaggactacgtggaccggctcgaattcgagctggac
accatcatcaagatgggcttccccggttacttcctgatcgtggccgacttcatccaatgg
ggcaaaaaccagggcattccgatcggcccgggccgcggctccggtgccggttcgctggtg
gcctgggcattgcagatcaccgatctggacccgctgccgtacaacctgctgttcgagcgc
ttcttgaaccccgagcgcgtgtcgatgcccgacttcgacatcgacttctgcatggaccgg
cgcgacgaagtcatcgactacgtggcgcgcaagtacggccgcgagcgggtcagccagatc
atcacctacggcaccatggccgccaaggcggtggtgcgcgatgcagggcgcgtactcggt
ttcacctacggtctggtcgatagcgtcgccaagctgatccccaacatcctgggcatcacg
ctgaaggatgcaatgggtgaaggcaaggactcggagatggcctcgccggatctgatccag
cgctaccaggtcgaagacgatgtgcgcgacctgatggatctggcgcgccagctcgaagac
ctcacccgcaacgccggcaagcacgccggcggcgtggtgattgcgcccgagccgctgagc
gagttctgcccgctgttcgccgaacacgacgaagacggccgtggcaagaacccggtgacc
cagttcgacaaggacgacgtcgaagcggtgggcctggtgaagttcgacttcctcggcctg
cgcacgctcaccatcatcgattgggcggtgaaggcgatcaatgtgcgccacgcgcgcgcc
ggcatcgacccggtcgacatcaccaccattccgctcgacgacatgcccacctacaagggc
gtgttcgcctcgggcagcaccggtgcggtgttccagttcgaatcctcgggcatgcgccgc
ctgctcaaggacgcgcggccggaccgcttcgaagacctgattgcgctggtgtcgctgtac
cgcccgggtccgatggacctgatcccggacttcaacgcgcgtaagcacggccagcaggaa
atcgtctaccccgatccgcgcaccgaagccatcctgaaagacacctacggcatcatggtg
tatcaggagcaggtgatgcagatggcgcaaatcgtcggcgattattcgctgggcggcgcc
gacctgctgcgtcgcgcgatgggcaagaaggtgccggccgaaatggccaagcaccgcgaa
atcttccgcgaaggtgcggccaagggtggcgtgagcgcagccaaggccgacgaaatcttc
gacctgatggagaagttcgccggctacggtttcaacaagtcgcacgccgccgcctacgcg
ttggtcagctaccagaccgcgtggctgaaacggcattacccggccgaattcatggccgcg
acgctgtcctcggacatggacaacaccgacaaggtggtcggctttctcgatgaggtgcgc
aacctcggcctcaccgtcaagccgccgcgggtcaacgagtctgcgtacatgttcgaggcg
gccagcccggacaccattcagtacggcctgggcgcgatcaagggcgtcggccagggcgcc
tgcgaggcgatcgtcgaagaacgccagcgcggcggcccctacaccacgctgctggatttc
tgcacgcgcgtaggcaccgcaaagctcaaccggcgcacgctggaagcaatgatcaatgcc
ggtgcgatggacggactgggcaagaaccgcgcctcgctgatgctgcagttgcccgaagtg
atgaaggccaccgagcagatggcacgcgaacgtgcatcgggccagaactcgctgttcggc
gggccggacccgagcgcgccggcgatgcgtttggacctgcccgaaagcaaggaatggccg
ctgggtcagttgctcaccggcgagcgcgaaacgctgggcttctacctcagcggccacccg
ttcgacccgcaccgcgaagaggtccgcgaactggtcggctgcgacctgggagcgctggaa
aagatcctcgcttcgcaacaacgcggcggcggtggaggcggcggcgatggcgaaaaacgc
gcctggcgcccggaagtcagcgccatcgttgccggccaggtgatcggcgtgcgccgcaag
ggcgacagccaggtgttcgtgcaactcgaagacggccggggccgggttgaatgcagcgcg
ttctccgatgcgatggccgagttcggccacctgctcacccgcgaccgcatcctgatcgtc
aaaggcggcctgcgcgaggacgaattcaacggcggctacagcctgcgcatccgccaatgc
tgggattacgagcagatctgcgccgaccacgcgcagcgcctgtcactgcgtctggacctg
cgcgaaaaacaggccttcaggcgcatcgacgccctgctggccaagcaccgccccggcaag
acccccttgcgcctggacctgctgctgcgcgcccagagcggcggcgtggccggcatgctc
gatctcaacggcagccactcggtacgcatcgaccagcagctgatggacagcctgcgcgcc
gaccccgcggtacggaccttgaagatcaagtacaacccgccgtgggcgtga
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