Xanthomonas vasicola pv. vasculorum: C7V42_13370
Help
Entry
C7V42_13370 CDS
T05388
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
xva
Xanthomonas vasicola pv. vasculorum
Brite
KEGG Orthology (KO) [BR:
xva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xva03016
]
C7V42_13370
Enzymes [BR:
xva01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
C7V42_13370
Transfer RNA biogenesis [BR:
xva03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C7V42_13370
Prokaryotic type
C7V42_13370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AVQ07451
UniProt:
A0AAE8F752
LinkDB
All DBs
Position
complement(2921791..2922900)
Genome browser
AA seq
369 aa
AA seq
DB search
MSETSLLPRAHGAAVLSAAMRSTPDDFQVDELPAFEPSGEGEHLLLTVRKRGQNTAYIAK
KLAHWAGIAEMGVSYAGLKDRHAVTTQRFSVHLPKRIAPDIAALDDAEMQVVDSTWHNRK
LQRGALHGNRFVLTLRQVQGERDAIDDRLQAIAARGIPNWFGEQRFGRDGGNVAGALAMF
GYTQAADGTLAPAPTSKRRLRNDQRSMLLSAARSALFNRVLAARVAQGSWDRALEGEAWM
LDGSRSVFGPEPWSDVLAERLARFDIHPSGPLWGVGDLRSTDQAATVEQGALSDPQSEAL
RQGLEAAGLKQERRALRLRPQGLDYRWLEAQTLQLEFALPPGCYATAVLWELGEVTDAGR
FNAGVRSDE
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagacctctttgctgccacgtgcgcatggcgctgccgtgctcagcgcggcaatg
cgcagcacgccggacgactttcaggtcgacgaactcccggcattcgagccatccggtgaa
ggtgagcatttgctgctcaccgtgcgcaagcgaggtcagaacaccgcctatatcgccaaa
aagctcgcgcactgggccggcatcgccgaaatgggcgtcagttatgcaggtttgaaagat
cgccatgcagtgaccacccagcgcttcagtgtgcatctgcccaagcgcatcgcgccggat
atcgccgcgctggacgacgccgagatgcaggtggtcgatagcacctggcacaaccgcaag
ctgcagcgcggtgcgctgcatgggaaccgttttgtgttgacgctgcgccaggtacagggc
gaacgcgatgcaatcgatgaccgcttgcaggcgatcgccgcacgcggcattccgaattgg
tttggcgaacaacgcttcggtcgcgatggcggcaacgtggcgggcgcgttggcgatgttc
ggttatacgcaagctgccgacggcacattggcgccggcgccaacatccaagcggcggctg
cgcaacgatcagcgctcgatgctgctgtcggcggcgcgctcggccttgttcaatcgtgtc
ctcgctgcacgggtggcgcagggcagctgggatagggcgctggagggcgaggcatggatg
ctggacggctcgcgcagcgtcttcggcccggagccgtggagcgatgtgctggccgagcgc
ctggcgcgtttcgatattcatcccagtggcccgttgtggggcgtgggtgatttgcgttcg
actgatcaggccgcaacggtggagcagggcgcgttgtccgatccgcaatctgaagcgctg
cgccaaggcctggaagcagcagggctgaagcaggaacgccgcgcgctgcgtttgcgtccg
caaggcctggactatcgatggctggaggcgcagaccctgcaattggagttcgcgctgccg
cctggttgttatgccaccgcggtgctgtgggaattgggtgaggtcaccgacgcaggccgt
ttcaacgccggtgtgcgttctgacgagtga
DBGET
integrated database retrieval system
