Xanthomonas vasicola pv. vasculorum: C7V42_13400
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Entry
C7V42_13400 CDS
T05388
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
xva
Xanthomonas vasicola pv. vasculorum
Pathway
xva00541
Biosynthesis of various nucleotide sugars
xva01100
Metabolic pathways
xva01250
Biosynthesis of nucleotide sugars
Module
xva_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
xva00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
C7V42_13400
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xva01005
]
C7V42_13400
Enzymes [BR:
xva01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
C7V42_13400
Lipopolysaccharide biosynthesis proteins [BR:
xva01005
]
Lipid A
C7V42_13400
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
AVQ09121
UniProt:
A0AAE8JWR9
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All DBs
Position
complement(2926478..2927308)
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AA seq
276 aa
AA seq
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MKLCDFEVGLDQPLFLIAGPCVIESMQLQLDVAGKLKEITGKLGVNFIFKSSFDKANRTS
GTSFRGPGLEEGLKVLDAVKQQIGVPVLTDVHEYTPMNEVAAVVDVLQTPAFLVRQTDFI
KNVCAAGKPVNIKKGQFLAPWDMKPVVDKAKSTGNEQIMVCERGASFGYNNLVSDMRSLS
VMRDTGCPVVFDATHSVQLPGGQGSSSGGQREFVPVLARAAVAVGISGLFAETHPDPSKA
LSDGPNAWPLDRMEELLETLMELDAVTKKHGFARFA
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgtgtgactttgaagttggcctggatcagccgttgttcctgatcgccggcccc
tgcgtgatcgagtcgatgcagctgcagctcgacgtggccggcaagctcaaggaaatcacc
ggcaagctcggtgtcaacttcattttcaagtcgagtttcgacaaggccaaccgcacctcc
ggtaccagcttccgtggcccgggcctggaagagggcctgaaggtgctggatgcggtgaag
cagcagatcggcgtgccggtgctcaccgacgtccacgaatacaccccgatgaatgaggtc
gcggccgtcgtcgacgtgctgcagaccccggcatttctggtgcgccagaccgacttcatc
aagaacgtctgcgccgccggcaagccggtcaatatcaaaaagggtcagttcctggcaccg
tgggacatgaagccggtggtggacaaggccaagtcgaccggcaacgagcagatcatggtc
tgcgagcgtggtgcctcgttcggctacaacaatttggtcagcgacatgcgctcgctgagc
gtcatgcgcgacaccggctgcccggtggtgttcgatgccacccattcggtgcagttgccg
ggcgggcagggcagcagttccggtggccagcgcgagttcgtgccggtgctggcgcgtgcg
gcggtggcggtcggtatttccggcctgtttgccgagacccacccggatccgtccaaggcg
ctgtccgatggccctaacgcgtggccgctggatcgcatggaagaactgctcgaaactctg
atggaactggatgccgtcaccaagaagcacgggttcgcgcgcttcgcatga
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