Xanthomonas vasicola pv. vasculorum: C7V42_13545
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Entry
C7V42_13545 CDS
T05388
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
xva
Xanthomonas vasicola pv. vasculorum
Pathway
xva03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C7V42_13545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xva03400
]
C7V42_13545
DNA repair and recombination proteins [BR:
xva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C7V42_13545
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C7V42_13545
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_19
AAA_22
UB2H
Motif
Other DBs
NCBI-ProteinID:
AVQ07480
UniProt:
A0AAE8F3N9
LinkDB
All DBs
Position
complement(2956290..2958311)
Genome browser
AA seq
673 aa
AA seq
DB search
MTDRFQLVSPYSPAGDQPAAIDKLVANFEAGLAKQTLLGVTGSGKTYTIANVVQHVQKPT
LVMAPNKTLAAQLYGEFKSFFPHNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINEHIE
QMRLSATKTLLSRRDSLVVATVSAIYGLGAPEDYLSLRLILSVGEHIDQRQLIRHLTDLQ
YTRNEFELTRGAFRVRGEVLDVFPAESDTEALRIELFDGDIEQLTLFDPLTGETLRKLQR
YTVYPKTHYATTRERTLSAVDTIKEELKERLEQLYSQNKLVEAQRLAQRTQFDLEMMAEV
GFCNGIENYSRHLTGKAPGEPPPTLFDYLPPDALLVIDESHVTIPQIGAMYKGDRSRKET
LVEFGFRLPSALDNRPLRFEEWEARSPRSIYVSATPGPYELRESAGEVTELVVRPTGLID
PVVEIRPVGTQVDDLMSEIHERIKLGDRVLVTTLTKRMSENLTEYLGEHGIRVRYLHSDI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTIG
RAARNLRGKAILYADKMTRSMQAAIDETDRRREKQVEYNLEHGITPKSVERPISDIMEGA
REDAVEKKSGKGRSKSRQVAEETPDYRAMKPAEIAGKLKSLEQKMYQHAKDLEFEAAAQI
RDQIQKLKAASLG
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccgttttcagctcgtatctccatactcgccagcgggcgaccagcctgccgcc
atcgacaagttggttgccaacttcgaggctgggctggccaaacagacgctgctgggtgtg
accggttcgggcaagacctacacgattgccaatgtggtccagcatgtgcagaagccgacc
ctggtgatggcgccgaacaagacgctagcagcgcagttgtatggcgagttcaagtcgttt
tttccgcacaacgcggtggagtatttcgtcagctactacgactactaccagccggaggct
tacgtgccgtcgtcggacaccttcatcgagaaggacagttcgatcaacgaacacatcgag
cagatgcgcttgtcggcgacgaagaccctgctgtcgcggcgcgattcgctggtggtggca
acggtgtcggcaatctatggtctcggcgcgccggaagactatctttcgctgcgcttgatc
ctgtcggttggtgagcacatcgatcagcgccagctgatccgccatctcaccgatctgcag
tacacccgcaacgaattcgaactcacgcgtggcgcctttcgcgtgcgcggcgaggtgctg
gatgtgtttccggccgagtcggataccgaggccctgcgcatcgagttgtttgatggcgat
atcgaacaattgacgctgttcgatccgttgaccggcgagaccttgcgcaagctgcagcgc
tacaccgtgtacccgaaaacgcattacgccacaacgcgcgagcgcaccctgagtgcagtg
gataccattaaagaagagttgaaagagcgcctggaacagctctactcgcagaacaagttg
gtcgaggcgcaacgtctggcgcagcgcacgcaattcgatctggaaatgatggccgaagtg
ggtttctgcaacggcatcgaaaactactcgcggcatctcaccggcaaggcgcccggcgag
ccgccgccgaccttgttcgactacctgccgccagacgcgctgctggtcatcgacgaatcg
catgtgaccattccgcagatcggcgcgatgtacaagggcgaccgctcgcgcaaggaaacg
ctggtggagttcggcttccgcttaccgtctgcactggataaccggcctttgcgcttcgag
gagtgggaagcgcgttcgccgcgcagcatctatgtctcggcgacgcccggtccttacgag
ttgcgcgagtcggcaggtgaggtcacagagttggtggtacgcccgactggcttgatcgac
ccggtagtggagatccgcccggtcggcacgcaggtcgacgacctcatgtccgagattcac
gaacgcatcaagctcggcgaccgcgtattggtgaccacgctgaccaagcgcatgtccgag
aacctcaccgagtacctgggcgagcacggcattcgggtgcgctatctgcactcggatatc
gacaccgttgagcgcgtggaaatcattcgcgatctgcgcttgggcaagttcgatgttctg
gtcggcatcaatctgctgcgcgaaggcttggacatgccggaagtttcactggtggcgatc
ctggatgccgacaaggaaggcttcctgcggtcgacaggttcgctaatccagaccatcggc
cgtgccgcgcgtaatctgcgcggcaaggccattctgtatgccgacaagatgacgcgttcg
atgcaggcggcaatcgacgagaccgatcgtcgccgcgagaagcaggtcgagtacaacctg
gagcatggcatcacaccgaagtccgtcgagcggccgatctccgacatcatggaaggtgcg
cgcgaagatgcagtcgagaagaagtcgggcaagggacgttcgaagtcgcgccaggttgcc
gaagagacacccgattatcgcgccatgaagcccgcggaaatcgccggcaagctcaagagc
ctggagcagaagatgtatcagcatgcaaaggatctggagttcgaggccgcagctcaaatt
cgcgaccagatccagaagctgaaagcggcaagcctgggctag
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