Xanthomonas vasicola pv. vasculorum: C7V42_13655
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Entry
C7V42_13655 CDS
T05388
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xva
Xanthomonas vasicola pv. vasculorum
Brite
KEGG Orthology (KO) [BR:
xva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xva03016
]
C7V42_13655
Enzymes [BR:
xva01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
C7V42_13655
Transfer RNA biogenesis [BR:
xva03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C7V42_13655
Prokaryotic type
C7V42_13655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AVQ07500
UniProt:
A0AAE8F3I2
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All DBs
Position
complement(2981151..2982077)
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AA seq
308 aa
AA seq
DB search
MKPRIFYRPLHGILLLDKPAGLSSNNALQVARRLLRAEKGGHTGSLDPLATGLLPLCFGE
ATKIAGLLLRSAKAYDAEIVLGVTTDTDDADGEPLRKRAVPDVSEADLQAALARFIGRIE
QQAPIYSALKQGGEPLYAKARRGEVIEAPVREVEVQAIEVLGYSAPRLQLRVTCGSGTYI
RSLARDLGEVLGCGAHIASLRRLWVEPFRAPQMITLEALAAALEADTDAQTVLLPIEAGL
AGFARIVLDETLAARFRMGQRLRDAAFPTGQVAVFGPDGNPSGLGLVDADGRLSPQRLFN
GLNEISVC
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaccccgcatcttctaccgcccgttgcacggcatcctgttgctggacaagccggcc
gggctcagttccaacaatgcattgcaggtggcgcgccggctattgcgtgcagagaagggt
ggccataccggcagcctggatccgctggccaccggcctgctaccgctgtgctttggcgaa
gcgaccaagatcgccggactgctgctgcggtcggccaaggcgtacgacgccgagatcgtg
ttgggcgtcaccaccgataccgacgatgccgacggcgagccgctgcgcaaacgtgcggtg
cccgacgtgagcgaggccgatctgcaagcggcgctggcgcgcttcatcggccgtatcgag
cagcaggcgccgatctattccgcactcaagcaaggcggtgagccgctgtatgccaaggcg
cggcgcggcgaagtcatcgaggcgccggtacgtgaggtcgaggtgcaggcgatcgaggtg
ctgggctacagcgcgccgcgtctgcaactgcgcgtgacctgcggctcgggcacctatatc
cgcagcctggcgcgtgatctgggcgaagtgctgggctgcggcgcgcacatcgcttcgttg
cgtcggctgtgggtggagccgtttcgcgccccgcagatgatcacgctggaagcgttggcg
gcagcgctggaagcggacaccgatgcgcagacagtgctgctgccgatcgaggccggtctg
gccggtttcgcgcggatcgtgcttgatgagaccctcgcggcgcgtttccgcatggggcag
cgcttacgcgatgctgcattcccgactggccaggtggccgtgttcggaccggacggaaac
ccctcaggcctaggcttggtggatgcggatgggcgcctgtcgccgcagcgattgttcaat
ggactgaacgagatttcagtctgttaa
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