Xanthomonas vasicola pv. vasculorum: C7V42_13960
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Entry
C7V42_13960 CDS
T05388
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
xva
Xanthomonas vasicola pv. vasculorum
Brite
KEGG Orthology (KO) [BR:
xva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xva03009
]
C7V42_13960
Enzymes [BR:
xva01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
C7V42_13960
Ribosome biogenesis [BR:
xva03009
]
Prokaryotic type
ribosomal protein modification factors
C7V42_13960
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
TRAM
PrmA
Motif
Other DBs
NCBI-ProteinID:
AVQ07552
UniProt:
A0AAE8JUV6
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All DBs
Position
complement(3038430..3039794)
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AA seq
454 aa
AA seq
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MSQLNPKVGFVSLGCPKALVDSERILTQLRVEGYDIVPSYDAADVVVVNTCGFIDSAVTE
SLDAIGEAMNANGKVIVTGCLGKRPEQIREAYPQVLAVSGPQDYQSVMEAVHAALPPRHD
PFVDLVPDYGIKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVDEVLREAERLVR
GGVKELLVVSQDTSAYGVDLKYAERPWRDRMYQTRMKALCEGLSELGVWTRLHYVYPYPH
VDDVIPLMAEGKLLPYLDIPFQHASPRILKLMKRPGAVEKTLERVQRWKAMCPEITVRST
FIVGFPGETDAEFESLLDFLDQAQLDRVGAFAYSPVDGAGANALPDPVPEEVKQERLARF
MAKQAEISALRLEAKIGSVQQCLVDLIEDDIAVARSRADAPEIDGLVHIQNGGELGLKVG
DLVDVEITDSDEHDLFGDALPVKSNRGIELAVIS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagctgaaccccaaagtcggcttcgtcagccttggctgcccgaaggcgctcgtc
gattccgaacgcatcctcacccagctgcgcgtggagggctacgacatcgtgcccagctac
gacgctgccgatgtggtggtggtcaacacctgcggcttcatcgattcggcggtgaccgag
tcgctggatgcaattggcgaggcgatgaatgccaacggcaaggtcatcgtcaccggctgc
ctgggcaagcgcccggagcaaattcgcgaagcgtatccgcaggtgctggcggtatcgggt
ccgcaggactaccagagcgtgatggaggcggtgcacgccgccttgccgccgcgtcacgac
ccgttcgtggatctggtgccggactacggcatcaagctgaccccgcgccattacgcgtat
cttaaaatttccgaaggctgcaatcaccgttgcagcttttgcatcattccgtcgatgcgt
ggcgatctggtctcgcgtccggtggatgaagtattgcgcgaggccgaacggctggtgcgc
ggtggcgtcaaggaattgctggtggtgtcgcaggacacctctgcctacggcgtagacctg
aaatatgccgagcgtccgtggcgtgaccgcatgtatcaaacccgcatgaaggcgctgtgc
gaaggtttgtcggagttgggcgtgtggacgcgcctgcattacgtgtatccatatccgcac
gtggatgatgtgattccgctgatggccgaaggcaagctgttgccgtatctggacatcccg
ttccagcacgccagcccgcgcattctcaagctgatgaagcgcccgggtgcagtggaaaag
accctggagcgcgtgcaacgctggaaggcgatgtgcccggagatcaccgtgcgctcgacc
ttcatcgtcggcttccccggcgagaccgatgccgagttcgaatccttgctcgattttttg
gatcaggcgcagctggaccgcgtcggtgcgttcgcgtattcgccggtcgatggcgccggc
gccaacgccttgccggacccggtgccggaggaagtgaagcaggagcgcctggcacgcttc
atggccaagcaggcagaaatttctgcgttgcggctggaagcaaaaatcggcagcgtgcag
cagtgcctggtggatctgatcgaagacgacatcgcggtggcgcgctcacgtgccgatgcg
ccggagatcgatggtttggtgcatatccagaacggcggcgagctcgggctgaaggtgggc
gatctggtcgacgtggaaatcaccgacagcgatgagcacgatctgtttggcgatgcgttg
ccggtaaagagcaatcgcgggattgaacttgcggtgatcagctag
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