Xanthomonas vasicola pv. vasculorum: C7V42_14855
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Entry
C7V42_14855 CDS
T05388
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K12526
bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:
4.1.1.20
2.7.2.4
]
Organism
xva
Xanthomonas vasicola pv. vasculorum
Pathway
xva00260
Glycine, serine and threonine metabolism
xva00261
Monobactam biosynthesis
xva00270
Cysteine and methionine metabolism
xva00300
Lysine biosynthesis
xva00470
D-Amino acid metabolism
xva01100
Metabolic pathways
xva01110
Biosynthesis of secondary metabolites
xva01120
Microbial metabolism in diverse environments
xva01230
Biosynthesis of amino acids
Module
xva_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
xva_M00018
Threonine biosynthesis, aspartate => homoserine => threonine
Brite
KEGG Orthology (KO) [BR:
xva00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C7V42_14855 (lysA)
00270 Cysteine and methionine metabolism
C7V42_14855 (lysA)
00300 Lysine biosynthesis
C7V42_14855 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C7V42_14855 (lysA)
09110 Biosynthesis of other secondary metabolites
00261 Monobactam biosynthesis
C7V42_14855 (lysA)
Enzymes [BR:
xva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.2 Phosphotransferases with a carboxy group as acceptor
2.7.2.4 aspartate kinase
C7V42_14855 (lysA)
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
C7V42_14855 (lysA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
AA_kinase
Orn_DAP_Arg_deC
ACT_9
Ala_racemase_N
ACT
Motif
Other DBs
NCBI-ProteinID:
AVQ07696
UniProt:
A0AAE8F3T7
LinkDB
All DBs
Position
complement(3243064..3245673)
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AA seq
869 aa
AA seq
DB search
MSAPHSTDRWIVLKFGGTSVSRRHRWDTIGKLASKRASETGGRVLVVVSALSGVTNELTA
IADGAADSAQRVAALNQRHREFLAELELDADAVLGERLAALHALLSDARAAARTLEWQAE
VLGQGELLSSTIGAAYLHASGLDMGWLDARQWLSALPPQPNQSEWSKRLSVSCQWQSDAD
WRARFAAQPTRLLITQGFISRHTDGGTAILGRGGSDTSAAYFGALLGASRVEIWTDVPGM
FSANPKEVPDARLLTRLDYYEAQEIATTGAKVLHPRSIKPCRDSGVPMAILDTERPDLPG
TSIDGNAEPVLGVKAISRRNGIVLVSMEGIGMWQQVGFLADVFTLFKKHGLSVDLIGSAE
TNVTVSLDPSENLVNTDVLAALSADLSQICKVKIIVPCAAITLVGRGMRSLLHKLSDVWA
TFGQERVHMISQSSNDLNLTFVIDESDADGLLPILHAELIDSGAMPVSEGDVFGPRWREI
IGSVRPRPTPWWHAERTHLLSLSKAGTPRYAYHLPTVRERAHALAQIAAVDQRYYAIKAN
AHPAILIALEQAGFGLECVSHGELRRVFQALPELSPRRVLFTPSFAPKAEYEAAFALGVT
VTVDNVEALRNWPELFRGRNIWLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVEVA
RTLEVTITGVHAHLGSGVETGEHWRMMYDELAGFARRIGTVETIDIGGGLPIPYSAEDEP
FDLDVWAKGLAEVKAVHPGYRLAIEPGRYLVAEAGVLIASVTQVIEKDGVERVGLDAGMN
TLMRPALYDAWHDIENLSRLDAPADGTFDIVGPICESSDVFGKRRRLPSATAPGDVVLVA
DTGAYGYSMASTYNQRELPREEVIDAPAG
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctccccactctaccgatcgttggatcgtcctcaagttcggcggcacctcggtg
tcgcgtcgtcatcgctgggacacgattggaaaactggcgagcaaacgggccagcgaaacc
ggcggccgcgtgctggtggtggtgtccgcattgtcgggcgtgaccaacgaactcaccgcc
attgccgatggtgccgccgacagcgcacagcgcgtggccgcactgaaccaacgccatcgt
gagtttctggccgagctcgaactggacgccgatgcggtgctgggcgagcgactggccgca
ctgcacgcattgctgagcgacgcgcgcgctgcagcgcgcacgctggagtggcaggccgag
gtgttggggcagggcgagttgctgtcgtccaccatcggtgcggcgtatctgcatgccagc
ggcctggacatgggctggctggatgcgcgccagtggctatcggcgctgccgccgcagccc
aatcagagcgaatggtccaagcgcttgtcggtgtcgtgccaatggcagtccgatgctgat
tggcgcgcacgtttcgctgcgcagcccacgcgcttgttgatcacccagggcttcatttcg
cggcacaccgatggtggtaccgcgattctgggccgcggcggttcggacacctcggcggcc
tacttcggtgcgttgcttggcgccagccgggtagaaatctggaccgacgtgcccggcatg
ttcagcgccaacccgaaagaggtgccggacgcgcgcctgctgacgcggctggactattac
gaagcgcaggaaatcgccaccaccggcgccaaggtgctgcatccgcgctcgatcaaaccg
tgccgcgattccggcgtaccgatggcgattctggacaccgagcgccccgatctgccgggc
accagcatcgacggcaatgccgagccggtgttgggcgtcaaggcgatcagccgccgcaac
ggcatcgtgctggtgtcgatggaaggcatcggcatgtggcagcaggtcggcttcctggcc
gatgtgtttacgctgttcaagaagcatggcctgtcggtggatttgatcggttctgccgag
actaacgtcaccgtgtcgctggatccttcggaaaatctggtcaacaccgatgtactggcg
gcgttgtcggccgatctgtcgcagatctgcaaggtcaagatcattgttccgtgcgcggcc
atcaccctggtcgggcgcggcatgcgctcactgctacacaagctctccgacgtgtgggcc
acgttcgggcaggagcgcgtgcacatgatttcgcagtcgtccaacgacttgaatctgacc
ttcgtcatcgacgaatccgatgcggatggcttgctgccgatcctgcatgcggaactcatc
gatagcggtgcgatgccggtcagcgagggcgacgtgttcggcccacgctggcgcgagatc
atcggctcggtacgcccgcgccccacgccgtggtggcatgccgagcgcacgcatctgttg
tcgctctccaaggccgggacgccgcgctatgcgtaccacctgcccacagtgcgcgagcgt
gcgcacgcattggcgcagatcgccgcagtggatcaacgctattacgcaatcaaggccaac
gcgcatccggccattttgattgcgctggaacaggccggcttcgggctggaatgcgtctcg
catggagaattgcgccgcgtgtttcaggcgctgcccgagctgtcgccgcggcgcgtgctc
ttcacgccgagctttgcacccaaggccgaatacgaagcggcatttgcgctgggcgtgacc
gttaccgtagataacgtcgaagcgctacgcaactggcccgagctcttccgtggccgcaat
atctggctgcgcatcgacctgggtcacggcgacggtcatcacgagaaggtcaacaccggt
ggcaaggcctccaagttcgggttgtcgtccacacgcgtggatgaatttgtcgaagtggcg
cgcacgctcgaagtcaccatcaccggcgtgcatgcgcacctgggcagtggcgtggagacc
ggcgaacactggcggatgatgtatgacgaactggccggctttgcacgccgcatcggcacg
gtggagaccatcgacattggtggcggcttgccgatcccgtacagcgccgaagacgagccg
tttgatctggatgtgtgggccaagggcctggccgaggtcaaggccgtgcatccgggctat
cgcctggcaatcgagccgggccgctatctggtggccgaagccggtgtgctgatcgccagc
gtcacccaggtgatcgaaaaggatggcgtggagcgcgtgggcctggatgcgggcatgaac
accttgatgcgcccggcgttgtacgacgcctggcacgacatcgaaaacctcagccggctg
gatgcgccggccgatggcacgttcgatatcgttgggccgatctgcgaatcgtcggacgtg
ttcggcaagcgccgccgcctgccctcggccactgcgcccggcgatgtggtactggtggcc
gacaccggcgcttacggctactcgatggccagcacctacaatcagcgcgaattgccacgc
gaagaggtgatcgatgcgcccgctggctga
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