Xanthomonas vasicola pv. vasculorum: C7V42_18380
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Entry
C7V42_18380 CDS
T05388
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
xva
Xanthomonas vasicola pv. vasculorum
Pathway
xva00521
Streptomycin biosynthesis
xva00523
Polyketide sugar unit biosynthesis
xva00525
Acarbose and validamycin biosynthesis
xva00541
Biosynthesis of various nucleotide sugars
xva01100
Metabolic pathways
xva01110
Biosynthesis of secondary metabolites
xva01250
Biosynthesis of nucleotide sugars
Module
xva_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
xva00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
C7V42_18380 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
C7V42_18380 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
C7V42_18380 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
C7V42_18380 (rfbB)
00525 Acarbose and validamycin biosynthesis
C7V42_18380 (rfbB)
Enzymes [BR:
xva01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
C7V42_18380 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
AVQ08267
UniProt:
A0AAE8F6G4
LinkDB
All DBs
Position
complement(4046108..4047163)
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AA seq
351 aa
AA seq
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MATWLVTGGAGFIGGNFVLEAVARGVRVVNLDALTYAGNLNTLASLEGNPDHVFVKGDIG
DGALVARLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPA
VRSDAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPV
LTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAK
GKVGETYNVGGNSERQNIEVVQAICALLDQHRPRDDGKPRASQITYVTDRPGHDRRYAID
ASKLKKELGWEPAYTFEQGIAQTVEWYLSHQDWVQSVLDGSYRMERIGLGA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
gtggcaacttggctagtgaccggcggtgccggcttcatcggtggcaactttgttcttgaa
gcagtggctcgcggggtgcgcgtggtcaatctcgatgcgctgacctatgcgggaaacctg
aacacgttggcatccttggagggtaatccggaccacgttttcgtcaagggcgatatcggc
gatggcgctctggtcgctcgcctgctgcaggagcaccagcccgatgcagtgctgaatttc
gcagccgagagccatgtagatcgctcgatcgaaggcccgggcgcgtttattcaaaccaac
gtcgtcgggacgttggccttgcttgaagcagtgcgcgactattggaaggcgctgcctgct
gtgcgtagcgatgccttccgcttcctgcacgtgtccaccgacgaggtctatggaacgctc
ggtgagaccggaaagttcacagaaactacgccttatgcgccgaactcgccgtattcggcg
tccaaggcggcctcggatcatctggtgcgtgcgttccaccacacctacggtctaccggta
ttgaccaccaattgttcgaacaattacggtccttaccacttccccgaaaagctcattccg
ttggtcatcgccaaagcgctggccggcgagccactgccggtttacggcgatggcaagcag
gtgcgcgactggctgttcgtcagcgaccactgcgaggcgattcgtaccgtgctggcgaag
ggcaaggtcggcgagacctacaacgtgggcggcaattcggaacgccagaatatcgaagtc
gtgcaggcgatctgcgcactgctggatcagcatcgtccacgtgacgatggtaagccgcgt
gcgagccagatcacctatgtgacggatcgcccgggtcatgaccgccgttacgcgatcgac
gcctcgaagctgaagaaggaactgggttgggaacctgcctacacgttcgagcaaggcatc
gcgcaaacggtggagtggtatctaagccatcaggattgggtgcagagcgttctggatggc
agctatcgaatggaacgaattggtctaggggcctga
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