Xanthomonas vasicola pv. vasculorum: C7V42_19565
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Entry
C7V42_19565 CDS
T05388
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xva
Xanthomonas vasicola pv. vasculorum
Brite
KEGG Orthology (KO) [BR:
xva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xva03032
]
C7V42_19565
03400 DNA repair and recombination proteins [BR:
xva03400
]
C7V42_19565
Enzymes [BR:
xva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C7V42_19565
DNA replication proteins [BR:
xva03032
]
Prokaryotic type
DNA Topoisomerases
C7V42_19565
DNA repair and recombination proteins [BR:
xva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C7V42_19565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AVQ08466
LinkDB
All DBs
Position
4287932..4290424
Genome browser
AA seq
830 aa
AA seq
DB search
MPKHLLIVESPAKAKTINKYLGKDFTVLASYGHVRDLVPKEGAVDPDNGFAMRYDLIEKN
EKHVEAIARAAKGADDIFLATDPDREGEAISWHIAEILKERGLLKDKPMQRVVFTEITPR
AIKEAMLKPRAIAADLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFIPREYWSIDAHCRHPSQAFNARLIKLDGQKFEQFTVTDGDTAEAARLRIQQ
AAQGVLHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTRKTMQVAQKLYEGVALGDE
GSVGLISYMRTDSVNLSQDALAEIRDVIARDFGTASLPDQPNAYTTKSKNAQEAHEAVRP
TSALRTPAQVARFLSDDERRLYELIWRRAVACQMIPATLNTVSVDLSAGSEHVFRASGTT
VVVPGFLAVYEEGKDTKSSEDEDEGRKLPLMKAGDNIPLDRIVTDQHFTQPPPRFTEAAL
VKALEEYGIGRPSTYASIIQTLQFRKYVEMEGRSFRPTDVGRAVSKFLSGHFTRYVDYDF
TANLEDDLDAVSRGEAEWIPLMEKFWGPFKELVEDKKDSLDKTDAGSVRVLGTDPVSGKE
VSARIGRFGPMVQIGTVEDEDKPTFASLRPGQSIYSISIEDALELFKMPRALGQDKDQDV
SVGIGRFGPFARRGSVYASLKKEDDPYTIDLARAVFLIEEKEEIARNRVIKNFEGSDIQV
LNGRFGPYISDGKLNGKIPKDREPASLTFEEVQQLLADTGKPVRKGFGAKKATLKKNTVK
DSSPKQPAVKKTATKTAASKTTAKKAPAKKAAAKKATKRVVKKTVSKAAN
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcacctgctcatcgtcgaatcgcccgccaaggccaagacgatcaataaatac
ctcggcaaggacttcaccgtcctggcctcgtatgggcacgtgcgcgacctggtccccaag
gaaggcgcagtcgatccggacaacggctttgcgatgcgttacgacctgatcgagaagaac
gaaaagcacgtcgaagccatcgcgcgtgctgccaagggtgccgacgacatctttctggcg
accgacccggaccgcgagggcgaggcgatcagctggcacatcgccgagatcctgaaggag
cgcggcctgctcaaggacaagccgatgcagcgggtggtgttcaccgaaatcaccccgcgc
gcgatcaaggaagccatgctcaagccgcgcgcgatcgccgccgatctggtggatgcgcag
caggcgcgccgcgcgctggactatctggtcggcttcaatctgtcgccggtgctgtggcgc
aaggtgcagcgcggcctgtccgctggccgcgtgcaatcgccggcgctgcgtatgatcgtc
gagcgcgaagaagagatcgaagccttcatcccgcgcgaatactggtccatcgatgcgcat
tgccggcatccctcgcaggcgttcaacgcgcgcctgatcaagctggacggacagaaattc
gagcagttcaccgtcaccgacggtgacactgccgaggccgcacgtttgcgcatccagcaa
gcggcgcaaggtgtgctgcatgtgaccgacgtggccagcaaggagcgcaagcgccgccct
gccccgccgttcaccacctccacgctccagcaggaagcctcgcgcaagctcggcttcacc
acccgcaaaaccatgcaggtggcgcagaagttgtacgaaggcgtggcactcggcgacgaa
ggctcggtcggtctgatcagctacatgcgtaccgactcggtgaacctgtcgcaggacgcg
ctggcggaaatccgcgatgtgatcgcgcgcgactttggcaccgcctcgctgcccgaccag
cccaacgcctacaccaccaaatccaagaacgcgcaggaagcccatgaagcggtgcgcccg
acctcggcgctgcgtacgccggcacaggtcgcgcgctttttgtccgacgacgagcgccgc
ctgtacgaattgatctggcgccgcgcggtggcctgccagatgattccagccacgctcaac
accgtcagcgtggacctgtcggccggcagcgagcacgtgttccgcgccagcggcaccacc
gtggtggtcccgggcttcctggccgtgtacgaagaaggcaaggacaccaagagcagcgag
gacgaggacgaaggccgcaagttgccgctgatgaaggccggcgacaacattccgctggac
cgcatcgtcaccgaccaacacttcacccagccgccgccgcgcttcaccgaagcggcgctg
gtcaaggcgctggaggaatacggcatcggccgtccgtccacctacgcctcgatcattcag
accctgcagttccgcaagtacgtcgagatggaaggccgcagcttccgccccactgacgtc
ggccgtgctgtgtccaagttcctgtccgggcatttcacccgctacgtcgattacgacttc
accgccaatctggaagacgatctggatgcggtgtcgcgtggcgaagccgagtggattccg
ttgatggaaaagttctggggcccgttcaaggaattggtcgaagacaagaaagactcgttg
gacaagaccgatgccggcagcgtgcgcgtgcttggcaccgacccggtcagcggcaaggaa
gtcagcgcgcgcatcggccgcttcggcccgatggtgcagatcggcaccgtggaagacgag
gacaagcccacgttcgcgtcgctccgtccgggccagagtatctattcgatctccatcgaa
gacgcgctggaactgttcaagatgccgcgcgcactgggccaggacaaagaccaggatgtc
agcgtcggtatcggccgcttcggcccgtttgcgcgccgtggcagcgtgtatgcgtcactg
aagaaagaagacgatccgtacaccatcgacctggcgcgtgcagtgttcctgatcgaagag
aaggaagaaatcgcgcgcaaccgtgtgatcaagaacttcgaaggcagcgacatccaagtg
cttaatggccgcttcggcccgtacatcagcgacggcaagctcaatggcaagatccccaag
gatcgcgagccggcgtcgttgacgttcgaagaagtgcagcagctgctggccgataccggc
aagccagtgcgcaagggctttggtgcgaagaaggccacgctcaagaaaaatacggtcaag
gactcctcgccgaagcagcctgccgtcaagaagaccgcgaccaagacggcggccagcaag
accactgcaaagaaagcgccggccaagaaggccgctgccaagaaagccaccaagcgcgtg
gtcaagaagaccgtgagcaaggcggcgaactga
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