Xanthomonas vasicola pv. vasculorum: C7V42_21115
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Entry
C7V42_21115 CDS
T05388
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xva
Xanthomonas vasicola pv. vasculorum
Pathway
xva03030
DNA replication
xva03410
Base excision repair
xva03420
Nucleotide excision repair
xva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C7V42_21115
03410 Base excision repair
C7V42_21115
03420 Nucleotide excision repair
C7V42_21115
03440 Homologous recombination
C7V42_21115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xva03032
]
C7V42_21115
03400 DNA repair and recombination proteins [BR:
xva03400
]
C7V42_21115
Enzymes [BR:
xva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C7V42_21115
DNA replication proteins [BR:
xva03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
C7V42_21115
DNA repair and recombination proteins [BR:
xva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
C7V42_21115
NER (nucleotide excision repair)
GGR (global genome repair) factors
C7V42_21115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AVQ08728
UniProt:
A0AAE8F9E8
LinkDB
All DBs
Position
complement(4617538..4620339)
Genome browser
AA seq
933 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLTNAQGEPTGALFGVVNMLRATLKERPAYIAFVVDAPG
KTFRDDLYADYKANRPSMPDDLRAQVQPMCDIVHALGIDILRIDGVEADDVIGTLALQAA
ADGLSVTISTGDKDFAQLVRPGIELVNTMSGSRMDSDEAVIAKFGVRPDQIVDLLALMGD
TVDNVPGVEKCGPKTAAKWLAEYDSLDGVIANADKIKGKIGDNLRAALPRLPLNRELVTI
KTDVTLASGPRALDLREPNTETLAVLYARYGFTQALREMGGTSAQAGLLSEPVALGAAAA
TARTEPGRARGTGFVSGPVNAAVDLDPALSAPGEYETILTQEQLDSWIVQLRAAGQFAFD
TETDSLDPLQADLIGLSVAAEPGKAAYLPFGHNFPGAPVQLDRTQALAQLVPLLTDPAVR
KLGQHGKYDLHVMRRHGVELAGYAHDTLLESFVLNSGSARHDMDSLAKRYLGYDTVKYED
VCGKGAKQIPFAQISLEDATRYAAEDADITLRLHHVLGPKLAAEPGLERVYREIEMPLVD
VLARIEANGVCVDAAELRRQSADLSKRMLAAQQKATELAGRTFNLDSPKQLQALLFDELK
LPAVVKTPKGQPSTNEEALEAIADQHELPRVILEYRGLTKLRSTYTDKLPEMIHPQSGRV
HTSYHQAGAATGRLSSSDPNLQNIPIRTEDGRRIRRAFVAPAGRKLIACDYSQIELRIMA
HLSGDPGLVGAFESGADVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMYGMSAFGLAR
QLGIGRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQ
RAGAERAAINAPMQGTAADIIKRAMVSVDGWIAGHAQRAKMILQVHDELVFEADTDFVDT
LLSEVTTRMASAAELRVPLVVDSGIGDNWDEAH
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgagcagattagtcttgatcgacgggtccagttacctgtatcgcgcgttccacgcgctt
ccgccgctgaccaatgcgcagggcgagcccaccggcgccttgtttggcgtggtcaacatg
ctgcgcgccaccttgaaggagcgcccggcctacatcgccttcgtggtggatgcgcccggc
aagaccttccgtgatgacttgtatgcagactacaaggccaatcggccgtccatgcccgac
gacctgcgcgcgcaggtgcagccgatgtgcgacatcgtgcatgcgctgggcatcgacatc
ctgcgcatcgacggcgtggaagccgacgatgtaatcggcacgcttgcactgcaagccgcc
gccgatgggttgagcgtcaccatctccaccggcgacaaggacttcgcgcagctggtgcgc
ccgggtatcgaactggtcaacaccatgagtggcagccgcatggattcggacgaggcggtg
atcgccaagttcggcgtgcggcccgatcagatcgtcgacctgttggcgctgatgggcgac
accgtcgacaatgtgcccggcgtggaaaagtgcggccccaagaccgctgccaaatggctg
gccgaatacgattcgctggacggcgtcatcgccaacgccgacaagataaagggaaagatc
ggcgacaacctgcgcgctgcgttgccacgcctgccgctcaaccgcgagctggtcaccatc
aagaccgacgtaaccctggccagcggcccgcgcgcgctggacctgcgcgagcccaatacg
gaaacgctggcggtgctgtacgcgcgctacgggttcacccaggcgctgcgtgagatgggc
ggcacgtcggcgcaggccgggctgttgtccgagccggtggcgctgggcgctgccgccgcc
actgcgcgcaccgagccgggccgcgcgcgcggtaccggcttcgtgtccggcccggtcaac
gccgcggtggatctggatccagcgctgtcggcgccgggcgagtacgagaccatcctcacc
caggagcaactcgacagctggatcgtgcagctgcgtgccgccggccagtttgccttcgat
accgaaaccgacagcttggacccgctgcaggcggatttgatcggcctgagtgtggccgcc
gagcccggcaaagcggcgtacctgccgttcgggcataacttccccggcgcgccggttcag
ctcgaccgcacccaagcgctggcgcaattggtcccgttgctcaccgacccggcggtgcgc
aaactcggccagcacggcaagtacgacctgcacgtgatgcgccggcatggcgtggaactg
gccggctacgcccacgacaccttgctggaaagcttcgtgctcaattccggcagcgcccgc
cacgacatggacagcctggccaagcgctatctcggctacgacaccgtcaagtacgaagac
gtctgcggcaagggcgccaagcagatcccgttcgcccagatcagcctggaagacgccacc
cgctacgccgccgaagacgccgacatcaccctgcgcctgcaccacgtgctcggccccaag
ctggccgccgaacccggcctggagcgggtctaccgcgagatcgaaatgccgctggtggac
gtgctggcccgcatcgaagccaacggcgtgtgcgtggacgcggccgaactgcgccgccag
agcgcggacctgtccaagcgcatgctcgccgcccagcagaaagccaccgagctggccggg
cgcaccttcaacctggattcgcccaagcaactgcaggccctgctgttcgacgagctcaag
ctccccgccgtggtcaagacgcccaagggccagccctcgaccaacgaagaagcgctggaa
gccatcgccgaccagcacgagttgccgcgggtgatcctggaataccgtggcctgaccaag
ctgcgcagcacctacaccgacaagctgccggagatgatccacccgcagtccgggcgcgtg
cacaccagctaccaccaggccggcgccgccaccgggcggctgtcctcgtcggacccgaat
ctgcagaacatcccgatccgcaccgaagacggccgccgtattcggcgcgctttcgtcgca
ccggccggacgcaagttgatcgcctgcgactactcgcagatcgagctacgcatcatggcg
cacctgtccggcgaccccggcctggtgggcgcattcgagtccggcgccgacgtgcaccgc
gccactgctgccgaagtgttcggccgcaccatcgacaccgtcagcggtgacgagcgccgc
gccgccaaggcgatcaacttcggcctgatgtacggcatgagcgcgttcggtctggcccgc
cagcttggcatcggccgtggcgaagcgcaggactacatcgcgctgtacttcagccgctat
ccgggcgtgcgcgacttcatggaaaccacccgccagcaagcgcgcgacaagggctacgtg
gaaaccgtgttcggccgccggctgtatctggatttcatcaatgccggcagccagggccag
cgtgctggcgccgagcgcgctgccatcaacgcgccgatgcagggcactgcggccgacatc
atcaagcgcgccatggtcagcgtggatggatggatcgccggccacgcgcaacgcgccaag
atgatcctgcaggtgcacgacgaactggtgtttgaagccgataccgatttcgtcgacaca
ctgctgagcgaggtcaccacgcgcatggcctccgcggctgaattacgcgtgccgctggtg
gtggattcgggcattggcgataactgggacgaggcgcattga
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