Xanthomonas vasicola pv. vasculorum: C7V42_21165
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Entry
C7V42_21165 CDS
T05388
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xva
Xanthomonas vasicola pv. vasculorum
Pathway
xva03420
Nucleotide excision repair
xva03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C7V42_21165
03430 Mismatch repair
C7V42_21165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xva03400
]
C7V42_21165
Enzymes [BR:
xva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C7V42_21165
DNA repair and recombination proteins [BR:
xva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C7V42_21165
MMR (mismatch excision repair)
Other MMR factors
C7V42_21165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
InPase
Motif
Other DBs
NCBI-ProteinID:
AVQ08736
UniProt:
A0AAE8JUS5
LinkDB
All DBs
Position
complement(4627108..4629294)
Genome browser
AA seq
728 aa
AA seq
DB search
MDVSHLLDHLNPAQREAVSAPPGHYLVLAGAGSGKTRVLIHRIAWLNEVQGVPNHGIFAV
TFTNKAAGEMRHRTDLQLRNGSRGMWIGTFHGLAHRLLRLHWQDARLPEGFQVMDSDDQL
RLVKRVVQSLELDESKYPPKQMSWWINEQKDEGRRPQHIQPEPNDDWTEVRRQVYAAYQE
RCDRSGLLDFAELLLRAHELLRDTPALLAHYRARFREILVDEFQDTNAIQYAFVRVLAGE
SGNVFVVGDDDQAIYGWRGAKVENVQRFLKDFPGAQTVRLEQNYRSSANILGAANAVIAH
NPDRIGKQLWTDSGDGDPIDLYAAYNEVDEARYVVERARQWVRDGGSYGEVAVLYRSNAQ
SRALEEALISEQLPYRVYGGMRFFERAEIKDALAYLRLLTNRSDDAAFERAVNTPTRGIG
DRTLDEVRRLARANALSLWEAAMLCTQQNTLAARARNALATFLSLVGQLHAETGEMELAE
RIDHVLMRSGLREHWAKESRGGLDSESRTENLDELVSVASRFTRPDDEDSQGMTELVAFL
AYASLEAGEGQAQAGEEGVQLMTLHSAKGLEFPIVFLVGLEDGLFPSARSLEESGRLEEE
RRLAYVGITRARQKLVLCYAESRRIHGQDNYNVPSRFLREIPRDLLHEVRPKVQVSRTAS
LGATRGGPVHGVVEAAPIKLGANVEHPKFGGGVVVDYEGAGAHARVQVQFDEVGAKWLVM
AYANLTVV
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtctctcatttgctcgatcatttaaaccccgcccagcgcgaggccgtttccgca
ccgccggggcattacctcgtgctggctggcgccggctccggcaagacgcgcgtgctgatc
catcgtattgcctggctcaatgaagttcagggcgtgcccaaccacggcatcttcgcggtg
accttcaccaacaaggccgccggtgaaatgcgccaccgcaccgacctgcagctgcgcaac
ggcagtcgcgggatgtggatcggcaccttccatggactggcgcatcgcctgttgcgtctg
cattggcaggatgcgcggctgccggaaggcttccaggtcatggacagcgatgaccagctg
cggttggtcaagcgcgtggtgcagtcgctggagctggacgagagcaagtatccgcccaag
cagatgagctggtggatcaacgaacagaaagacgaaggccggcgtccgcagcacatccag
cccgagcccaacgacgattggaccgaggtccgccggcaggtgtacgcggcctatcaggaa
cgctgcgaccgctccggtctgctggatttcgccgaattgctgctgcgcgcgcacgagctg
ctgcgcgacacgcctgcattgctggcgcattaccgcgcacgcttccgcgaaattttggtg
gacgagtttcaagacaccaacgccatccagtatgctttcgtgcgcgtgctggccggcgaa
tcgggcaacgtgttcgtggtgggcgacgacgaccaggccatctatggctggcgcggtgcc
aaggttgaaaacgtccagcgtttcctgaaggatttccccggcgcgcagaccgtgcggctg
gagcagaactaccgttccagtgccaatatcctgggcgctgccaatgccgtgattgcgcac
aacccggaccgcatcggcaagcagctgtggaccgattccggcgatggcgacccgatcgat
ctgtatgcggcctacaacgaagtcgacgaggcgcgttatgtggttgagcgtgcgcggcag
tgggtgcgcgacggcggcagttatggcgaagtggccgtgctctaccgcagcaacgcgcaa
tcgcgcgcgctggaagaagcgctgatttccgagcagctgccgtaccgcgtgtatggcggc
atgcgcttcttcgaacgtgccgaaatcaaggatgcattggcgtacctgcgcctactcacc
aaccgcagcgacgatgcagccttcgagcgtgcggtcaacacgcccacgcgcggcatcggc
gatcgcacgctggatgaggtgcgccggttggcgcgtgccaatgcgttgtcgttgtgggaa
gcggcgatgctgtgcacgcagcagaacacgctggccgcacgggcacgcaatgccttggcg
accttcctcagtctggtcggccaactgcatgccgaaaccggcgagatggaactggccgaa
cgcatcgaccacgtgctgatgcgctcgggcctgcgcgagcattgggccaaggaaagccgt
ggtgggctggattcggaatcgcgcaccgagaacctggacgaactggtgtcggtcgcctcg
cgctttacccgcccggacgatgaagacagccagggcatgaccgagctggtcgccttcctc
gcttacgcctcactcgaagccggcgaaggccaggcacaggccggcgaagaaggcgtgcag
ctgatgacgctgcattcggccaagggcctggaatttccgattgtgtttctggtcgggttg
gaagatggcttgttcccgagcgcgcgctcgttggaagagagcgggcggctggaagaagag
cggcgcctggcgtatgtgggcatcacccgcgcgcggcagaagctggtgctgtgctacgcc
gaatcgcgccgcatccacggccaggacaactacaacgtgccgtcgcgctttctgcgcgaa
atcccgcgcgatctgctgcatgaagtgcgccccaaggtgcaggtctcgcgtactgcctcc
ctgggcgcgacacgcggcgggccggtgcatggtgtggtggaagcggcaccgatcaagctt
ggcgccaacgtcgaacatcccaagttcggcggcggcgtggtcgtggactacgaaggcgct
ggcgcgcatgcgcgcgtgcaggtgcagttcgatgaagtcggcgccaagtggctggtgatg
gcttacgccaatctgactgttgtgtag
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