Xanthomonas vasicola pv. vasculorum: C7V42_22100
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Entry
C7V42_22100 CDS
T05388
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
xva
Xanthomonas vasicola pv. vasculorum
Pathway
xva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C7V42_22100 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xva03400
]
C7V42_22100 (recD)
Enzymes [BR:
xva01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C7V42_22100 (recD)
DNA repair and recombination proteins [BR:
xva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C7V42_22100 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
SH3_13
NAT10_TcmA_helicase
AAA_22
DEAD
T2SSE
UvrD_C
nSTAND3
AAA_16
SLFN-g3_helicase
AAA_28
AAA_29
DUF6002
Motif
Other DBs
NCBI-ProteinID:
AVQ08871
UniProt:
A0AAE8FAM5
LinkDB
All DBs
Position
complement(4850162..4852399)
Genome browser
AA seq
745 aa
AA seq
DB search
MNHPNLLTALNQSGALRTLDLAFAHSLQRLAPDTDPQVLAAAALASLAVTSGHAGLDPAR
AAMLLDARDGPSPTFPDPADWQRTLAASRWVDQPQPEAPAAADCPLVLEHGLLYLRRYRE
YECRLALGLQRIATQTPPAFDAPTLAPLFAQLFPNATPTPRVVDRTPFPPRESARRAGEG
TGLPEPSLQQEGTHPPEPSSQGSNQAPPHTQDRQAQAAALALRRALLLVTGGPGTGKTTT
IARLLLLRIAQAHASNTPAPRIALAAPTGRAAERMAESLRAAVARAIAVGIDTALADALP
IGASTLHRLLGVIPDSPHFRHNADNPLPFDLIVVDEASMVDLPLMCKLVEAVADGTQLIL
LGDADQLPSVEAGDVLAAILQAAGPGDALQPDDAQALQPLLGSAPGGTPSAVISTTHTGG
LAGHRVHLLRGYRQADDFALAPLADAIRAGDADTVLALLRSGELAGVHFHEDGEDPLALG
RDALLAHWRALAAAQDPAVALRAASRLRLLTAVRAGPQGARGLNARIEQLLAETGSGARR
LGGASPWFQGRLLLITENSYRHGLFNGDVGICLRSDPGASAAPGERAHTHGRSGATAGAA
RSEADPHAGQAGQGALVAWFEGDGDGQVRGFHPAALPAHESAFAMTVHKAQGSEFDDVWL
QLPTRDARVLSRELLYTGITRARRALHLAGSEAVIRSALARHAARISGLAWRLGGSSDTP
QASAISTKAPLPQPPAGVPVQGALF
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacccaaatctcctcaccgccctcaaccaaagcggcgccctgcgcacgttggat
ctggccttcgcacacagcctgcaacgcctggccccggacaccgatccacaggtgctggcc
gccgccgcactcgcctccttggcggtcaccagcggccacgcaggactcgaccccgcccgc
gcggccatgttgctggacgcgcgcgatggcccatcgcccaccttcccggaccctgccgac
tggcaacgcaccctggccgcttcgcgctgggtcgaccaaccgcagcccgaagccccggcc
gctgccgattgcccgctcgtcctcgaacatggcctgctctacctgcgccgctaccgcgag
tacgaatgccgcctggccctgggcctgcagcgcatcgccacgcaaacaccgccagccttc
gacgcccccaccctggcgccgctattcgcgcaactattccccaacgcgacccccacccct
cgcgtcgtggaccgaacccctttccccccgcgagagagtgcccgcagggcgggtgagggt
acgggcctgcccgagccatccctccagcaagagggcacacatccacccgaaccatccagc
caagggtcgaaccaagccccaccccacacccaagaccgccaagcccaggccgcagccctc
gcgctgcgccgcgcattactgctggtcaccggcggccccggcaccggcaagaccaccacc
atcgcccgcctgctgttgctgcgcatcgcccaggcacatgcatccaacacgccggctcca
cgcatcgccctggccgcgcccaccggacgcgccgccgagcgcatggccgaaagcctgcgc
gccgccgtcgcgcgcgccatcgccgtcggtatcgacaccgccctggccgacgcactgccc
atcggcgccagcaccctgcaccgtttgctcggcgtcattccggactccccgcacttccgc
cataacgccgacaacccgctgccgttcgacctgatcgtggtcgacgaagcctccatggtc
gacctgccgctgatgtgcaaactggtcgaagccgtcgccgatggcacccagctgatcctg
ctcggcgatgccgaccaactgccttcggtggaagccggcgacgtgctcgccgccatcctg
caggccgccggccccggcgacgcgttgcagcccgacgacgcccaggcgctgcagccgctg
ctcggcagcgcgcccggtggcactccatccgcggttatctccaccacccataccggcggc
ctggccggtcaccgcgtgcacctgctgcgcggctatcgccaggcggacgactttgcgctt
gctccattggccgacgccatccgcgccggcgatgccgacaccgtcctggccctgctgcgc
agcggcgaactggccggcgtgcacttccacgaagacggcgaagacccgctggccctcggc
cgcgatgcgctgctcgcccactggcgcgcgctggccgctgcccaagacccggccgtcgcg
ctgcgcgctgcaagccgcctgcgcctgctcaccgcggttcgcgccggcccgcaaggcgca
cgcgggctcaacgcccgcatcgaacaactgctggccgaaacaggctccggcgcccgtcgc
ctcggcggcgcctcgccctggttccagggccgcctgctgctgatcaccgaaaacagctac
cgccacggcctgttcaacggcgacgtcggcatctgtttgcgcagcgacccgggcgcctcg
gcagcgcccggtgaacgtgcgcacacccacggccgcagcggcgcgactgctggtgcagca
cgcagcgaagccgatccccacgctggccaagccgggcagggcgccttggtcgcctggttc
gaaggcgacggcgacggccaggtgcgcggcttccaccccgccgcactgcccgcgcacgaa
agcgccttcgccatgaccgtgcacaaggcgcaaggcagcgaattcgacgacgtctggctg
caactgcccacccgcgacgcccgcgtcctcagccgcgaactgctctacaccggcattacc
cgcgcccgccgcgccctgcatttggccggcagcgaagcagtcatccgcagcgcactggca
cgccatgccgcgcgtatctcgggcttggcgtggcggttgggtggtagcagtgatacaccc
caagcaagtgcaatatcgaccaaagcgccgctaccccagccgccagccggcgtgccggtg
cagggcgcattgttctga
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