Xanthomonas vesicatoria: BJD12_02515
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Entry
BJD12_02515 CDS
T04741
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
xve
Xanthomonas vesicatoria
Brite
KEGG Orthology (KO) [BR:
xve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xve03032
]
BJD12_02515
03036 Chromosome and associated proteins [BR:
xve03036
]
BJD12_02515
03400 DNA repair and recombination proteins [BR:
xve03400
]
BJD12_02515
DNA replication proteins [BR:
xve03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BJD12_02515
Chromosome and associated proteins [BR:
xve03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BJD12_02515
DNA repair and recombination proteins [BR:
xve03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BJD12_02515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
PTS-HPr
CDC48_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
APP74312
UniProt:
F0BDK6
LinkDB
All DBs
Position
complement(580386..580697)
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AA seq
103 aa
AA seq
DB search
MTKSELIEILARRQAHLKSDDVDLAVKSLLEMMGQALSDGDRIEIRGFGSFSLHYRPPRL
GRNPKTGESVALPGKHVPHFKPGKELRERVSSVVPVDMADTAD
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtccgaattgattgaaatcctggcgcgacgccaagcgcatctgaagtcggac
gacgtggatctggcggtgaagtcactgctggaaatgatggggcaggcgctctccgatggt
gatcggatcgaaatccgcgggttcggcagtttttcgctgcattaccgtccgccacgcctg
ggccgtaatcccaagacgggcgaatcggtggcgttgccgggcaagcatgtgccgcatttc
aagccaggcaaggaattgcgtgagcgtgtcagctccgtggtcccggtcgatatggccgat
accgcagactga
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