Xanthomonas vesicatoria: BJD12_02620
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Entry
BJD12_02620 CDS
T04741
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
xve
Xanthomonas vesicatoria
Brite
KEGG Orthology (KO) [BR:
xve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xve03009
]
BJD12_02620
Enzymes [BR:
xve01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
BJD12_02620
Ribosome biogenesis [BR:
xve03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BJD12_02620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
APP74332
UniProt:
F0BDI5
LinkDB
All DBs
Position
604871..606508
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AA seq
545 aa
AA seq
DB search
MSDTPRKLSLNKLSLKRDSAPEAPKLEERLHKVLAQAGLGSRRALEQRIADGLIKVNGAV
AQTGMSVRSGDKIELDGRSFVASALTEPSRVLIYNKPEGEVTTREDPEGRPTVFESLPAL
KGSRWIAIGRLDINTTGLLLLTTDGELANAMMHPSYEVEREYVVRVRAPEGEEKVSDAII
ERLSRGVLLEDGGAKFDEIERIGGTDSHDWFRVVVKEGRNREVRRLWESQGCQVSRLKRS
RYGKISLPRELLRGQSIEVAQDKVDALRAELKLEEGAPSALTLQPVIGQRRAAKSTVHVS
RDGRSNAYVNGQTSGADEGRELRRFDNLREDRGRGGRGKPGGFKGGLTVSGEAAAKQSQQ
RPFKQRGPAKGDRSLPDGNPAAFRSWYVPDGVSTGPSGHRNAGPSGPGTGQARPYAKKGP
GGARPGAGGPGNARPGAGGPGRGGAGGGQGQSQGQGQRKHPYGHPGNAPSFPSDHANPGF
SPYGAARPTGRPTGARAGGPGGNRGPGGNRGPGGPGGAPRGAGGPGGRPPGGGNRRPPGG
GNRGR
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacactccccgcaagctgtcgttgaacaagctttccctcaagcgcgacagcgcg
cccgaagcgcccaagctggaagagcgcctgcacaaggtgctggcccaagccggcctgggt
tcgcgccgcgcgctcgaacagcgtattgccgatggcctgatcaaggtcaatggcgccgtc
gcgcagaccggcatgtcggtgcgtagcggcgacaagatcgagctggacggccgcagcttc
gtggccagcgcgctgaccgaaccttcgcgtgtgctgatctacaacaagcccgaaggcgaa
gtgaccacgcgcgaagatcccgaaggccgcccgaccgtgttcgagtcgctgccggcattg
aagggctcgcgctggatcgcgatcggccggctggacatcaacaccaccggcctgctgctg
ctgaccaccgacggtgagctggccaacgcgatgatgcacccctcctatgaggtcgagcgc
gagtacgtggtgcgcgtgcgcgccccggaaggcgaggaaaaggtctccgacgcgatcatc
gagcggctgtcgcgcggcgtgctgctggaagacggtggcgccaagttcgacgagatcgaa
cgcatcggcggcaccgattcgcacgactggttccgtgtggtggtcaaggaaggccgcaac
cgcgaagtgcgccgcttgtgggaatcgcagggctgccaggtcagtcgcctcaagcgcagc
cgctacggcaagatctcgctgccgcgcgaactgctgcgtgggcagtcgatcgaagtggcg
caggacaaggtcgacgctctgcgcgccgaactcaagctggaagaaggcgcgccgtctgca
ttgaccttgcagccggtgatcggccagcgccgcgccgccaaatccaccgtgcacgtttcg
cgcgatggccgcagcaatgcctacgtcaacggccagacctccggcgccgatgaaggccgc
gagctgcgtcgcttcgacaatctgcgtgaagatcgcggccgcggcggtcgcggcaagccc
ggcggtttcaagggtggcctgacggtcagcggcgaagctgctgccaagcaatcgcagcag
cgcccgttcaagcagcgtggcccggccaagggcgatcgttcgttgccggacggtaacccg
gccgcgttccgtagctggtatgtgcccgatggcgtgagcaccggcccgagcggtcaccgc
aacgccggccccagcggtcccggcaccggccaggcgcgtccttacgccaagaagggtccg
ggtggtgcacgcccaggcgctggcggcccaggcaatgcacgtcccggtgcaggtggtcca
gggcgtggcggtgccggtggtggacagggccagtcgcagggccaggggcagcgcaagcac
ccgtacgggcatccgggcaatgcaccgagctttccatccgatcacgccaatccgggtttc
agtccgtatggtgcagcacgtccgacaggtcgcccgactggcgcacgcgcaggcggcccc
ggcggcaaccgtgggccgggcggcaatcgcggtcccggtggtccgggcggtgcaccgcgt
ggtgccggtggcccgggtggacgcccaccgggcggcggcaatcgtcgcccgcccggcggc
ggtaatcgcggtcgctaa
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