Xanthomonas vesicatoria: BJD12_03250
Help
Entry
BJD12_03250 CDS
T04741
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
xve
Xanthomonas vesicatoria
Brite
KEGG Orthology (KO) [BR:
xve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xve03016
]
BJD12_03250
Enzymes [BR:
xve01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
BJD12_03250
Transfer RNA biogenesis [BR:
xve03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
BJD12_03250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
APP74439
UniProt:
F0BA79
LinkDB
All DBs
Position
734461..735930
Genome browser
AA seq
489 aa
AA seq
DB search
MPGTSVSDLSTATAVDAPALLPLPVARPQAPAVVRGKLYIKTHGCQMNEYDSAKMADVLA
ASEGLELTDNPEDADVVLVNTCSIREKAQEKVFSQLGRWRLLKESRAKAGGTPVIIGVGG
CVASQEGEAIVKRAPYVDLVFGPQTLHRLPELIRARRQSGKSQVDISFPEIEKFDRLPEP
RADGPSAFVSIMEGCSKYCSFCVVPYTRGEEVSRPFEDVLVEVAQLAAQGVREINLLGQN
VNAYRGAYGADADEAAQYADLGLLIRTIAQIEGIGRIRFTTSHPLEFSDSLVDAYRGVPQ
LANYLHLPVQAGSDRILSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIVGFPGETEAD
FEKTMKLIEDVGFDQSFSFVYSRRPGTPAADLEDDTPDAVKQARLARLQAHISAHAATIS
QSMVGSVQRVLVEGPSRRDPNELTGKSENMRPVNFPGNPRLIGQFVDVLITEAMSNSLRG
RIHLDDSTS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggacatccgtttccgatctgtccacggccaccgccgtggacgcccctgccctg
ctgccgttgccggttgcccgcccgcaagcacctgccgtggtgcgcggcaagctgtacatc
aagacccacggttgccagatgaacgagtacgactcggccaagatggccgacgtgcttgcc
gcctccgaagggttggagctgaccgacaaccccgaagacgccgacgtggtgctggtcaac
acctgctccattcgcgaaaaggcgcaggaaaaggtattcagccaattgggccgctggcgc
ttgctcaaggaaagccgcgccaaggccggcggcacgccggtgatcatcggcgtcggcggt
tgtgtggcatcgcaggaaggcgaggccatcgtcaagcgcgcgccgtatgtggatctggtg
ttcgggccgcagaccctgcatcgcctgccggaactgatccgtgcacgccgccagtccggc
aagtcgcaggtagacatcagcttcccggaaatcgaaaagttcgatcgcctgcccgaaccg
cgtgccgatggtccgtcggcgttcgtgtcgatcatggaaggctgctccaagtattgctcg
ttctgcgtggtgccctacacgcgcggcgaagaggtcagccggccattcgaggacgtgctg
gtggaagtggcgcagctggcggcgcaaggcgtgcgcgagatcaacctgctgggtcagaac
gtcaacgcgtatcgcggtgcgtatggcgccgatgcggacgaggcggcccagtatgccgat
ctgggtctgttgatccgcaccatcgcgcagatcgagggcatcggccgcatccgtttcacc
acctcgcatccgctggaattttccgattcgctggtggatgcgtatcgcggcgtgccgcag
ctggccaactacctgcatctgccggtgcaggcaggcagcgaccgcatcctgtcggcgatg
aagcgtggttacaccgcgctggaattcaaatccaagatccgcaagttgcgcgcggtgcgc
ccggacatttcgatcagctcggacttcatcgtcggttttcccggcgagactgaagcggat
ttcgaaaagaccatgaagttgatcgaagacgtcggtttcgatcagagcttttcgttcgtg
tattcgcgtcgccctggcacgccggccgcggatctggaagacgacacgcccgatgcagtc
aagcaagcgcgcctagcccgcttgcaggcgcacatcagtgcgcatgcggcgaccatttcg
caatccatggtcggcagcgtgcagcgggtgctggtggaaggcccgtcgcgccgcgatcca
aacgaactgaccggcaagagcgagaacatgcgcccggtgaatttccccggcaatccgcgt
ttgatcgggcagttcgtggatgtgctgatcaccgaggcgatgagcaactcgttgcgtggc
cgcatccatctggatgacagcaccagctga
DBGET
integrated database retrieval system
