Xanthomonas vesicatoria: BJD12_04270
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Entry
BJD12_04270 CDS
T04741
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xve
Xanthomonas vesicatoria
Brite
KEGG Orthology (KO) [BR:
xve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xve03016
]
BJD12_04270
Enzymes [BR:
xve01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BJD12_04270
Transfer RNA biogenesis [BR:
xve03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BJD12_04270
Prokaryotic type
BJD12_04270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
APP74601
UniProt:
F0BCD5
LinkDB
All DBs
Position
complement(973248..974174)
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AA seq
308 aa
AA seq
DB search
MKPRIVYRPLHGILLLDKPAGLSSNNALQAARRLLRAEKGGHTGSLDPLATGLLPLCLGE
ATKIAGLLLGSAKAYDAEVVLGVTTDTDDADGEPLRERAVPALSEDALRAALAPFIGRIQ
QQAPIYSALKQGGEPLYAKARRGEEIEAPVREVEVHAIELIGYQAPRLQVRVTCGSGTYI
RSLARDLGEVLGCGAHIASLRRLWVEPFRSPQMITLEVLSAALETGTRAEDLLLPIQAGL
ADFAQITLDQAHATRFRMGQRLRDPAFPVGQVAVFGPDGRPSGLGLVDADGRLSPQRLFN
GLNETAGC
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaccccgcatcgtctatcgcccgctacacggcatcctgttgctggataaaccggcc
gggctcagctccaataatgcgttgcaggccgcgcgccgcctgttgcgtgccgaaaaaggt
ggccacactggcagccttgacccgctggccaccggcttgctgccgttatgcctgggcgag
gcaaccaagatcgccggcttgctgcttggttcggccaaggcatacgacgccgaggtggta
ttgggcgtcaccaccgataccgacgatgccgacggcgagccgctgcgcgagcgtgcagtg
ccggcgttgagcgaagacgcattgcgtgcggccttggctccatttatcgggcgcatccag
cagcaggctccgatctattccgcgctcaagcagggcggtgagccgctgtatgccaaggca
cgccggggcgaggaaatcgaggcgccggtgcgcgaagtcgaggtgcatgcgatcgaattg
atcggctaccaggcgccgcgtctgcaagtgcgcgtgacctgtggctccggcacctacatc
cgtagcctggcccgcgatctgggtgaagtgctcggctgcggcgcgcatatcgcttcgctg
cgccggctgtgggtggagccgttccggtcgccacaaatgatcacacttgaagtgttgagc
gcggcattggaaacgggcacacgggcggaggatctgctgctgccgatccaggccgggctg
gccgattttgcgcagatcaccctcgaccaggcgcatgcgacccgctttcggatggggcaa
cgcttgcgcgaccccgcatttccagtcggtcaggtggccgttttcggcccggatggacgc
ccgtcaggccttggccttgttgacgctgacggtcggctgtcgccgcagcgcctgttcaat
ggactgaacgagactgcgggttgttaa
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