Xanthomonas vesicatoria: BJD12_04560
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Entry
BJD12_04560 CDS
T04741
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
xve
Xanthomonas vesicatoria
Brite
KEGG Orthology (KO) [BR:
xve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xve03009
]
BJD12_04560 (rimO)
Enzymes [BR:
xve01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
BJD12_04560 (rimO)
Ribosome biogenesis [BR:
xve03009
]
Prokaryotic type
ribosomal protein modification factors
BJD12_04560 (rimO)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
PrmA
Motif
Other DBs
NCBI-ProteinID:
APP74647
UniProt:
F0BFW6
LinkDB
All DBs
Position
complement(1033043..1034416)
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AA seq
457 aa
AA seq
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MSQLNPKVGFVSLGCPKALVDSERILTQLRVEGYDIVPSYDAADVVVVNTCGFIDSAVTE
SLDAIGEAMNANGKVIVTGCLGKRPEQIREAYPQVLAVSGPQDYQSVMEAVHAALPPRHD
PFVDLVPDYGIKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLASRPVDEVLREAERLVR
GGVKELLVVSQDTSAYGVDLKYAERPWRDRMYQTRMKALCEGLSELGVWTRLHYVYPYPH
VDDVIPLMAEGKLLPYLDIPFQHASPRILKLMKRPGAVEKTLERVQRWKAMCPEITVRST
FIVGFPGETDAEFESLLEFLDQAQLDRVGAFAYSPVDGASANALPDPVPEEVKQQRLARF
MARQAEISAARLEAKIGSVQQCLVDLIEDDIAVARSRADAPEIDGLVHIQNGGELGLKVG
DLIDVEITDSDEHDLFGDALPPTGAAQHGRALNLQMV
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagctgaaccccaaagtcggcttcgtcagccttggctgtccgaaggcgctcgtc
gattccgaacgcatcctcacccagctgcgcgtggagggctacgacatcgtgcccagctac
gacgcggccgatgtggtggtggtcaatacctgcggcttcatcgactcggcggtgaccgaa
tcgcttgatgccatcggcgaggcgatgaacgccaatggcaaggtgatcgtcaccggctgc
ctgggcaagcgccccgaacaaatccgtgaggcctacccgcaggtgctggcggtgtccggc
ccgcaggactaccagagcgtgatggaagcggtgcatgccgccttgccgccgcgccacgac
ccgttcgtggatctggtgcccgactacggcatcaagctgaccccgcgccattacgcctac
ttgaagatttcagagggctgcaatcaccgctgcagcttctgcatcattccctcaatgcgt
ggcgatctggcctcgcgtccggtcgatgaagtcctgcgcgaagccgagcggctggtgcgc
ggcggggtcaaggagttgctggtggtgtcgcaggacacctcggcctatggcgtggacctg
aagtacgccgagcgcccgtggcgcgaccgcatgtaccagacccgcatgaaggcgctgtgc
gaaggcctgtcggagctgggcgtgtggacgcgcctgcattacgtgtacccgtacccgcac
gtggacgacgtgatcccgctgatggccgaaggcaagctgttgccgtatctggatatcccg
ttccagcacgccagcccgcgcatcctcaagctgatgaagcggcccggtgcggtggaaaag
acgctggagcgtgtgcagcgctggaaggcgatgtgcccggagatcacggtgcgctcgacc
ttcatcgtcggtttccccggcgagaccgatgccgagttcgaatcgctgctggagttcctg
gatcaggcgcagctggatcgtgtcggcgcgttcgcgtattcgccggtggacggcgccagc
gccaacgcgctgccggacccggtgccggaagaggtgaagcagcagcggctggcgcgtttc
atggccaggcaggcggagatctccgccgcgcggctggaagccaagatcggcagcgtgcag
caatgcctggtcgacctgatcgaagacgacatcgcagtggcgcgttcgcgcgccgatgcg
ccggaaatcgacggcctggtgcatatccagaacggcggcgaactgggtttgaaggtcggc
gacctgatcgacgtggaaatcaccgacagcgacgagcacgatctgtttggcgacgcgttg
ccgcccaccggcgctgcccagcacgggcgcgcgctgaatctgcagatggtgtaa
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