Xanthomonas vesicatoria: BJD12_08695
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Entry
BJD12_08695 CDS
T04741
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xve
Xanthomonas vesicatoria
Pathway
xve00040
Pentose and glucuronate interconversions
xve01100
Metabolic pathways
xve02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xve00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
BJD12_08695
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BJD12_08695
Enzymes [BR:
xve01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
BJD12_08695
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
APP75312
UniProt:
F0BCV4
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Position
complement(2016277..2017410)
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AA seq
377 aa
AA seq
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MKPKFSTAAAASLFVGSLLLTGVANADPALEVATTGWATQNGGTKGGSKAAAANIYTVKN
AAELKSALKASVGSNGRIIKVSGIIDVSEGKPYTKTSDMKTRARLDIPTKTTLIGITSNA
EIREGYFYVKANDVIIRNLTIENPWDPEPVWDPDDGSAGNWNSEYDGLTVEGATNVWVDH
VTFTDGRRTDDQNGTANGRPKQHHDGAMDVKKGANFVTISYSAFKSHEKNDLIGSSDSAS
STDSGKLKVTIHNTLFENISARAPRVRFGQVHLYNNYHVGSTSNKVYPFSHAHGVGKESK
IFSERNVFDISGVSSCDKIAADYGGSVYRDQGSLLNGKALSCSWNSNIGWTPPYTYNLLS
ADKVAADVKAKAGAGKL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgaaattttcgacggcggcagccgcgtcgctgtttgtcgggtcgttgctgctc
actggcgttgcaaacgccgatcctgcgctggaagtggcaaccactgggtgggcgacacag
aacggcggcaccaagggcggctccaaagccgctgctgccaacatctacacggtcaagaac
gccgccgagttgaagagcgcgttgaaggcgagcgtgggtagcaacgggcgcatcatcaag
gtcagcggcatcatcgatgtcagcgaaggcaagccctacaccaagacctcggacatgaaa
acgcgcgcgcgtctggatatcccgaccaagaccaccttgatcggcatcaccagcaacgcc
gaaatccgcgaaggctatttctacgtcaaggccaacgacgtcatcatccgcaacctcacc
atcgaaaatccatgggacccggagccggtctgggatccggatgatggcagtgccggcaac
tggaattccgaatacgacgggctgaccgtggaaggcgccaccaacgtatgggtggaccac
gtgacctttaccgatggtcgtcgcaccgacgatcagaacggcaccgccaatggtcgcccc
aagcaacatcacgacggcgcgatggacgtcaagaaaggcgccaacttcgtgaccatctcg
tattcggcattcaagtcgcacgaaaaaaacgatctgatcggctccagcgacagcgcctcc
agcaccgatagcggcaagctcaaggtgaccatccacaacaccttgttcgagaacatttcc
gcacgtgcaccgcgtgtgcgtttcggccaggtgcatctctacaacaactaccacgtcggc
agcaccagcaataaggtctacccgttctcgcacgcgcatggcgtgggcaaggaatcgaag
atcttttccgagcgcaatgtgttcgatatcagtggcgtaagcagctgcgacaagatcgcc
gccgactacggtggcagcgtgtaccgcgaccagggctcgctgctcaatggcaaggcactg
agctgctcctggaacagcaacatcggctggactccgccttacacctacaacttgctgtcg
gccgacaaggtggctgccgacgtcaaggccaaggctggcgccggcaagctgtag
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