Xanthomonas vesicatoria: BJD12_10025
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Entry
BJD12_10025 CDS
T04741
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
xve
Xanthomonas vesicatoria
Pathway
xve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BJD12_10025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xve03021
]
BJD12_10025
03019 Messenger RNA biogenesis [BR:
xve03019
]
BJD12_10025
Transcription machinery [BR:
xve03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BJD12_10025
Messenger RNA biogenesis [BR:
xve03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BJD12_10025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA
OB_RNB
S1CSD-TOTE-2
Fungal_virus_P2_C
Mor
Spore_III_AA
AAA_22
ResIII
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
APP77753
LinkDB
All DBs
Position
2288757..2290091
Genome browser
AA seq
444 aa
AA seq
DB search
MPSSDGSNEPFIARPHPAVPEGFPVYSLSDLKRMPAQKLLDIADQLNIQEGVARARKQDV
IFALLKVLTRHGEGVAADGVLEILPDGFGFLRAAEASYLAGPDDTYISPSQIRRFNLRTG
DHLSGRIRFPKDGERYFALSIVDTINGEPLEASKNKVLFENLTPLFPRRRFRLERGDGST
EDITGRILDLMAPQGKGQRALIVSPPKAGKTMMMQQVATAITTNHPEVHMIVLLIDERPE
EVTEMQRTVRGEVISSTFDEPAARHVQVAEMVIERAKRLVEHKKDVVILLDSITRLARAY
NNVVPSSGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVETGSKMDEVIYEE
FKGTGNSEVHLNRRITEKRVYPAIDINRSGTRREDLLIEPELLQKIWILRKLLHPMDEIA
AMEFLLDKMKTTKSNDEFFSSMKR
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcttccgatggcagcaacgagcccttcatcgcgcgtccgcacccggccgtaccg
gagggcttcccggtctattcgctgagcgatctcaagcggatgccggcgcagaagctgctg
gatatcgccgaccagctcaacatccaggaaggcgtggcgcgcgcgcgcaagcaggacgtg
atcttcgccctgctcaaggtgctgacccgccatggcgaaggcgttgccgccgacggcgtg
ctggaaatcctgcccgacggcttcggcttcctgcgtgccgccgaggccagctacctggcc
ggcccggacgatacctatatctcgcccagccagatccgccgcttcaacctgcgcactggc
gaccatttgtccggccgcatccgcttccccaaggacggcgaacgctattttgcgctgtcg
atcgtggacaccatcaacggtgagccgctggaagccagcaagaacaaggtgctgtttgag
aacctgaccccgctgttcccgcgtcgccggttccgtctggaacgtggcgatgggtccacc
gaggacatcaccggccgcatcctggatctgatggcgccgcagggtaagggtcagcgcgcg
ctgatcgtctccccgcccaaggccggtaagacgatgatgatgcagcaagtggccacggcc
atcaccaccaatcatcccgaagtgcacatgatcgtgttgttgatcgacgagcgcccggaa
gaagtgaccgaaatgcagcgcaccgtgcgcggcgaggtcatctcctccacgttcgacgag
ccggccgcgcgccacgtgcaggtcgccgagatggtgatcgagcgggccaagcgcctggtc
gagcacaagaaggacgtggtgatcctgctcgactcgatcacccgcctggcgcgcgcctac
aacaacgtggtgcccagctcgggcaaggtgctcaccggtggtgtggacgccaacgccctg
caccgcccgaagcgcttcttcggtgcggcgcgtaacgtggaagaaggcggctcgctgacc
atcatcgccacggcgctggtggaaaccggcagcaagatggacgaggtgatctacgaagag
ttcaagggcaccggcaacagcgaagtgcatctgaatcgtcgcatcaccgaaaagcgcgtg
tatccggcgatcgacatcaaccgttcgggcacgcgtcgcgaagatctgttgatcgagccg
gagctgctgcagaagatctggatcctgcgcaagctgctgcacccgatggacgaaatcgcc
gcgatggaattcctgctggacaagatgaagaccaccaagtccaacgacgagttcttcagt
tcgatgaagcgctga
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integrated database retrieval system
