Xanthomonas vesicatoria: BJD12_11245
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Entry
BJD12_11245 CDS
T04741
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xve
Xanthomonas vesicatoria
Pathway
xve03030
DNA replication
xve03410
Base excision repair
xve03420
Nucleotide excision repair
xve03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BJD12_11245
03410 Base excision repair
BJD12_11245
03420 Nucleotide excision repair
BJD12_11245
03440 Homologous recombination
BJD12_11245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xve03032
]
BJD12_11245
03400 DNA repair and recombination proteins [BR:
xve03400
]
BJD12_11245
Enzymes [BR:
xve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BJD12_11245
DNA replication proteins [BR:
xve03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BJD12_11245
DNA repair and recombination proteins [BR:
xve03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BJD12_11245
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJD12_11245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
APP75723
UniProt:
F0BH73
LinkDB
All DBs
Position
complement(2557843..2560623)
Genome browser
AA seq
926 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLTNAQGEPTGALFGVVNMLRATLKERPAYVAFVVDAPG
KTFRDDLYADYKANRPSMPDDLRAQVQPMCDIVHALGIDILRIDGVEADDVIGTLALQAA
SDGLSVTISTGDKDFAQLVRPGIELVNTMSGSRMDSDAAVIAKFGVRPNQIVDLLALMGD
AIDNVPGVEKCGPKTAAKWLAEYDSLDGVIANADKIKGKIGENLRAALPRLPLNRELVTI
KTDVVLASGPRALDLRDPNAEALAVLYARYGFSQALRELGGAAAAGVQTDAMAVARTEPG
RARGTGFVSGPASAPVELDPALAAPGQYETILTQAQLDNWIVRLRAAGQFAFDTETDSLD
PLQANLIGLSVAAEPGQAAYLPFGHDFPGAPAQLDRTQALAQLAPLLTDPALRKLGQHGK
YDLHVMRRHGVELAGYADDTLLESFVLNSGSARHDMDSLAKRYLGYDTVKYEDVCGKGAK
QIKFAQVSLEDATRYAAEDADITLRLHQVLGPKLSAEPGLERVYRDIEMPLVEVLARIEA
NGVCVDAAELRRQSADLSKRMLAAQQKATELAGRTFNLDSPKQLQALLFDELKLPAVVKT
PKGQPSTNEEALEAIADQHELPRVILEYRGLTKLRSTYTDKLPEMIHPQSGRVHTSYHQA
GAATGRLSSSDPNLQNIPIRTEDGRRIRRAFVAPPGRKLIACDYSQIELRIMAHLSGDPG
LVSAFESGADVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMYGMSAFGLARQLGIGRG
EAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQRAGAERA
AINAPMQGTAADIIKRAMVSVDGWIAEHAQRALMILQVHDELVFEADIDFVDTLLSEVTA
RMATAAQLRVPLVVDSGVGDNWDEAH
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgagcagattagtcctgatcgacgggtccagttacctgtatcgcgcgttccacgcgctt
ccgccgctgaccaatgcccagggcgagcccaccggcgcgctgttcggcgtggtcaacatg
ctgcgcgccaccttgaaggaacgccccgcgtacgtggcgttcgtggtggatgcgcccggc
aagacatttcgtgatgacttgtatgccgactacaaggccaaccgcccgtcgatgccggat
gacctgcgcgcgcaggtgcagccgatgtgcgacatcgtgcatgcgctgggcatcgacatc
ctgcgcatcgacggcgtggaagcggacgatgtgatcggcacgctggcgctgcaggccgcc
agcgatggcttgagcgtcaccatctccaccggcgacaaggacttcgcgcagctggtgcgt
ccgggcatcgaactggtcaacaccatgagcggcagccgcatggattcggacgcggcggta
atcgccaagttcggcgtgcggcccaaccagatcgtggacctgctggcgctgatgggcgat
gccatcgacaacgtgcccggcgtggaaaagtgcggccccaagaccgccgccaaatggctg
gccgaatacgactcgctcgacggcgtgatcgccaacgccgacaagatcaagggcaagatc
ggcgagaacctgcgcgccgccctgccacgcctgccgctcaaccgtgagttggtcaccatc
aagactgacgtagtgctggccagtggcccgcgtgcgctggacctgcgcgaccccaatgcc
gaagcgctggccgtgctgtacgcccgctatggtttcagccaggccctgcgcgagctgggc
ggcgccgcggctgccggcgtgcagaccgacgccatggcggtggcccgcaccgaacccggt
cgcgcccgcggtaccgggttcgtctccggcccggccagcgcgccggtggagctggacccg
gccctggccgcgcccggccagtacgagaccatcctcacccaggcgcagctggacaactgg
atcgtccgcctgcgcgcggccggccagttcgccttcgataccgaaaccgacagcctggac
ccgctgcaggccaacctgatcggcctcagcgtggccgccgaacccggccaagcggcgtac
ctgccgttcggccacgacttccccggcgcgccggcccagctcgatcgcacccaggcactg
gcccagctggcaccgctgctcaccgaccctgcgctgcgcaagctcggccagcacggcaag
tacgacctgcacgtgatgcgccgccatggcgtcgagctggccggctatgccgacgacacc
ttgctggagagcttcgtgctcaattccggcagcgcccgccacgacatggacagcctggcc
aagcgctatctaggctacgacaccgtcaaatacgaagacgtctgcggcaagggggccaag
cagatcaagttcgcgcaggtcagcctggaagacgccacccgctacgccgccgaagatgcc
gacatcaccttgcgtttgcatcaggtgctcggccccaagctgtccgccgaaccagggctg
gagcgcgtctaccgcgacatcgagatgccgctggtggaagtgcttgcccgcatcgaagcc
aacggcgtgtgcgtggacgcggccgaactgcgccgccagagcgcggacctgtccaagcgc
atgctcgctgcccagcagaaggccaccgagctggccgggcgcaccttcaacctggactcg
cccaagcagctgcaggcgctgctgttcgacgagctcaagctacccgccgtggtcaagaca
cccaagggccagccctcgaccaacgaagaggcgctggaagccatcgccgaccagcacgag
ctgccgcgggtgatcctggaataccgcggcctgaccaagctacgcagcacctacaccgac
aagctgccggagatgatccacccgcaatccgggcgcgtgcacaccagctaccaccaggcc
ggcgcggccaccgggcggctgtcctcgtccgatcccaacctgcagaacatcccgatccgc
accgaagacggccgccgcatccgccgcgccttcgtcgctccgcccgggcgcaagctgatt
gcctgcgactactcgcagatcgagctgcgcatcatggcccacctgtccggcgaccccggg
ctggtgagcgcgttcgagtccggcgcggacgtgcaccgcgccaccgccgccgaagtgttc
ggccgcaccatcgacaccgtcagcggcgacgagcgccgcgccgccaaggcgatcaacttc
ggcctgatgtacggcatgagcgcgttcggcttggcccgccagctgggcatcggccgtggc
gaagcacaggactacatcgcgctgtacttcagccgttacccgggcgtgcgcgacttcatg
gaaaccacccgccagcaggcgcgcgacaagggctacgtggaaaccgtgttcggccgccgg
ctgtatctggacttcatcaatgccggcagccagggccagcgcgccggcgccgagcgcgcg
gccatcaacgcgccgatgcagggcactgccgccgacatcatcaagcgcgcgatggtcagc
gtggatggctggatcgccgagcacgcgcagcgcgccctgatgatcctgcaggtgcacgac
gaactggtgttcgaagccgacatcgatttcgtcgatacgctgctgagcgaagtcaccgca
cgcatggcgacggcggcgcaattacgcgtgccgctggtggtggattcgggcgtgggcgat
aactgggacgaggcgcactga
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