Xanthomonas vesicatoria: BJD12_11460
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Entry
BJD12_11460 CDS
T04741
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xve
Xanthomonas vesicatoria
Pathway
xve03420
Nucleotide excision repair
xve03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BJD12_11460
03430 Mismatch repair
BJD12_11460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xve03400
]
BJD12_11460
Enzymes [BR:
xve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJD12_11460
DNA repair and recombination proteins [BR:
xve03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJD12_11460
MMR (mismatch excision repair)
Other MMR factors
BJD12_11460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
APP75756
LinkDB
All DBs
Position
complement(2617770..2619956)
Genome browser
AA seq
728 aa
AA seq
DB search
MDVSHLLDHLNPAQREAVSAPPGHYLVLAGAGSGKTRVLIHRIAWLNEVQGVPNHGIFAV
TFTNKAAGEMRHRTDLQLRNGSRGMWIGTFHGLAHRLLRLHWQDARLPEGFQVMDSDDQL
RLVKRVVQSLELDESKYPPKQMSWWINEQKDEGRRPQHIQPEPNDDWTEVRRQVYAAYQE
RCDRSGLLDFAELLLRAHELLRDTPALLAHYRARFREILVDEFQDTNAIQYAFVRVLAGE
TGHVFVVGDDDQAIYGWRGAKVENVQRFLKDFPGAQTVRLEQNYRSSANILGAANAVIAH
NPDRIGKQLWTDSGDGDPIDLYAAYNEVDEARYAVERARQWVRDGGSYGEVAVLYRSNAQ
SRALEEALISEQLPYRVYGGMRFFERAEIKDALAYLRLLTNRSDDAAFERAVNTPTRGIG
DRTLDEVRRLARANALSLWEAAMLATQENSLAARARNALAGFLSLVGQLHAETGQMELAE
RIDHVLMRSGLREHWAKESRGGLDSESRTENLDELVSVASRFTRPDDEDSQGMTELVAFL
AYASLEAGEGQAQAGEEGVQLMTLHSAKGLEFPIVFLVGLEDGLFPSARSLEESGRLEEE
RRLAYVGITRARQKLVLCYAESRRIHGQDNYNVPSRFLREIPRDLLNEVRPKVQVSRTAS
LGAARGGPVHGIVETAPIKLGANVEHPTFGGGVVVDYEGAGAHARVQVQFDEVGAKWLVM
AYANLTVV
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtctctcatttgctcgatcatttaaaccccgcccagcgcgaggccgtttccgca
ccgccggggcattacctcgtgctggccggcgccggctccggcaagacgcgcgtgctgatc
catcgcattgcctggctcaacgaagtccagggcgtgcccaaccacggcatcttcgcggtg
accttcaccaacaaggcggccggcgaaatgcgccaccgtaccgacttgcagctgcgcaac
ggcagccgcgggatgtggatcggcaccttccatgggctggcccatcgcttgctgcgtctg
cattggcaggacgcgcggttgcccgaaggcttccaggtcatggacagcgacgaccagttg
cgcctggtcaaacgcgtggtgcagtcgctggagctggacgagagcaagtatccgcccaag
cagatgagctggtggattaacgagcagaaggacgaaggccgccgcccgcagcacatccag
cccgagcccaacgacgactggaccgaagtgcgccggcaggtatacgccgcctatcaggag
cgctgcgaccgctccggcctgctggattttgccgagctgctgctgcgcgcgcatgagctg
ctgcgcgacaccccggcattgctggcgcattaccgcgcgcgcttccgcgagatcctggtg
gacgagttccaggacaccaacgccatccagtacgctttcgtgcgcgtgctggccggcgag
accgggcatgtgttcgtggtcggcgacgacgaccaggccatctatggctggcgcggtgcc
aaggtcgaaaacgtacagcgctttttgaaggacttccccggcgcgcagacggtgcggctg
gagcagaactaccgttccagcgccaatatcctgggcgcggccaatgcggtgatcgcgcac
aaccctgaccggatcggcaagcagctatggaccgactcgggcgatggcgatccgatcgat
ctgtatgcggcctacaacgaagtggacgaagcgcgctatgcggtcgagcgtgcacgccag
tgggtgcgcgatggcggcagctatggcgaagtggctgtgctgtatcgcagtaacgcgcag
tcgcgcgcgctggaagaagcgctgatctccgagcagttgccgtaccgcgtgtacggcggc
atgcgcttcttcgagcgcgccgaaatcaaggacgcgctggcctacttgcgcttgctcacc
aatcgcagcgatgacgccgcgttcgaacgcgcggtcaacacacccacccgcggcatcggc
gatcgcacgctggacgaagtgcgtcgtctggcgcgtgccaatgcgctgtcgttgtgggaa
gcggcgatgttggccacgcaggaaaacagcctggccgcgcgtgcgcgtaacgccctggcc
ggcttcctgagcctggtcggccagctgcatgccgaaaccgggcagatggaactggccgaa
cgcatcgaccatgtgttgatgcgctcgggcctgcgcgagcattgggccaaggaaagtcgc
ggcgggctggattcggaatcgcgcacagagaacctggacgaactggtctcggtggcctcg
cgcttcacccgcccggacgacgaagacagccagggcatgaccgaactggtcgccttcctc
gcctatgcctcgctggaggccggcgaaggccaggcgcaggccggcgaagaaggcgtgcag
ctgatgacgctgcattcggccaagggtctggaatttccgatcgtgtttttggtcgggctg
gaggatggcctgttcccgagcgcgcgttcgctggaagagagcggccggttggaagaagag
cggcgtttggcgtacgtgggcatcacccgcgcgcggcagaaactggtgctgtgctacgcc
gaatcgcggcgcatccacggccaggacaactacaacgtgccttcgcgcttcctgcgcgag
atcccgcgcgatctgctcaacgaagtgcgcccgaaggtgcaggtctcgcggactgcgtcg
ttgggcgcggcgcgtggcggcccggtgcatggcattgtcgaaaccgcaccgatcaagctc
ggcgccaatgtcgagcaccctaccttcggtggcggcgtggtcgtggactacgaaggtgcc
ggtgcgcatgcgcgggtgcaggtgcagttcgacgaagtcggcgccaagtggctggtgatg
gcctacgcgaacctgacggtggtgtag
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