Xanthomonas vesicatoria: BJD12_16120
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Entry
BJD12_16120 CDS
T04741
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
xve
Xanthomonas vesicatoria
Brite
KEGG Orthology (KO) [BR:
xve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xve03000
]
BJD12_16120
Transcription factors [BR:
xve03000
]
Prokaryotic type
Helix-turn-helix
Other families
BJD12_16120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
HTH_8
Sigma54_activ_2
HTH_30
HTH_23
PAS_4
AAA_5
HTH_7
AAA_2
MCM
PAS_9
PAS
HTH_22
HTH_AraC
HTH_20
HTH_17
HTH_50
TsaE
Mga
Motif
Other DBs
NCBI-ProteinID:
APP76492
LinkDB
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Position
complement(3713883..3715856)
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AA seq
657 aa
AA seq
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MSEPSVVAAPSVTLPEIEPDVLRQIRRLRDIAPLAPPLSRSWRRCLDDFALLPEATPEPL
VHDALHVRERQQRLGEVLRIAKVEMENLYEQIAGSGYAVIFGDAEATVLHSVQDSTLLRE
FRQAGLFCGASWAECHQGTNGLGTCAAERIPVSVHRGEHYLTRHLPLSCSGAPILDPHGG
LLAVLDASTPNAQDGKQIQRHTVALVSMSAAQISRSHFLNQFGHAFILRFHSRPEFAGLL
HEALIAIGADGRVLAVNEAVLEQLGKIDRSQLVGRDISQVMQLDFDTIEHRAGSDAGTLW
SIRCACHGRRFYALVRPPRARPALPAVGGPAQAASDSDLQPGEHVGSDPRMRHNLANALK
LAAHRVSILLRGDTGTGKEEFAKAVHRGSPWASGAFVAINCAAIPEALIESELFGYARGA
FTDAAREGRHGKLLQASGGTLFLDEIGDMPLPLQSRLLRVLEEQSVTPLGSERAVPLELH
VISASHRDLAQRVAAGEFREDLYYRLNGVVLHLPPLRERSDKAELIRTLLREENAEHSVR
ISEEAMHKLLSYAWPGNLRQLRNVLRTAAVLCSDGMIRLPNLPQEIVDAGSAPCLVDGGA
VAADDMPGRVALDQAERLVLQQQLERHRWNVSRTADALGISRNTLYRKLRKHGLDTG
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccaagcgttgtcgccgctccttccgtcaccctgccggagatcgaaccggat
gttctccggcagatcagacggctgcgcgacattgcgccgctggcgccaccgctgtcgcgg
tcgtggcggcgctgcctggatgactttgcgctgctccctgaggcgacacctgagccgttg
gtgcacgacgccctgcatgtgcgtgagcgtcagcagcggctgggcgaggtgctgcgcatc
gccaaggtggaaatggaaaacctgtacgagcagatcgcaggtagcgggtatgcggtgatc
tttggtgatgccgaggccaccgtcttgcacagcgtgcaggactccaccttgttgcgcgaa
ttccgtcaggcggggctgttctgtggcgccagctgggccgaatgccaccaggggaccaac
ggtctgggcacgtgcgcggccgagcgcatccccgtcagcgtacatcgcggcgagcactac
ctgacccgtcacctgccgctgtcctgcagcggcgcgccgatcctggacccgcatggtggg
ctgctggcagtgctggatgcgtccacccccaacgcccaggacggcaagcagatccagcgc
cataccgtagcgctggtgagcatgtcggccgcgcagatctcgcgctcgcattttctcaac
cagttcggccacgccttcatcctgcgctttcatagccgcccggaatttgccgggttgttg
catgaagcgctgatcgccatcggcgccgatggccgcgtgctggcggtcaacgaagcggtg
ctggagcagcttggcaagatcgaccgcagccagttggtgggccgcgacatctcgcaggtg
atgcagctggattttgacaccatcgaacaccgcgccggcagcgacgcaggcaccttgtgg
tcgatccgctgcgcctgccacgggcggcgcttctacgcgctggtacgcccgccacgcgcg
cgcccggcgctaccggcggtgggcgggccggcgcaggccgcatcggattcggacctgcaa
cccggcgagcacgtcggctcggatccgcgcatgcgtcataacctggccaatgcgctgaaa
ctggccgcccatcgcgtctcgatcctgctgcgcggggacaccggcaccggcaaggaagaa
ttcgccaaggctgtgcaccgtggttcgccctgggccagcggcgcgtttgtcgcgatcaat
tgcgccgccatcccggaggcgctgatcgaaagcgagttgttcggttatgcgcgtggggca
ttcaccgatgcggcgcgcgaagggaggcatggcaaattgctgcaagccagcggtggcacg
ctgtttctggatgaaatcggcgacatgccgctgcccttgcaaagccgcctgctgcgcgtg
ctggaagaacaaagcgtcaccccgctgggtagcgaacgtgcggtgccgctggaactgcac
gtcatcagcgcaagccatcgcgacctggcacagcgcgtggccgcaggcgaattccgcgag
gacctgtattaccggctaaatggcgtggtcttgcatctgccgcccctgcgcgagcgcagc
gacaaagccgagttgatccgcaccctgctgcgcgaagaaaacgcagagcacagcgtgcgg
atcagcgaagaggccatgcacaaactgctcagttacgcctggccgggcaacctgcgtcaa
ttgcgcaatgtgctgcgcacggccgcagtgctgtgcagcgacggcatgatccgcctgcct
aacctgccgcaggaaatcgtcgacgccggcagcgcgccgtgcctggtcgacggcggtgca
gtggccgccgacgatatgccgggccgggtcgcgctggatcaggccgaacgcctggtgttg
cagcaacaactcgaacgccatcgctggaatgtcagccgcaccgccgacgcactgggcatc
agccgcaatacgctgtatcgcaagctgcgcaagcacgggttggataccgggtga
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