Xanthomonas vesicatoria: BJD12_17930
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Entry
BJD12_17930 CDS
T04741
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
xve
Xanthomonas vesicatoria
Pathway
xve03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xve00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BJD12_17930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xve03021
]
BJD12_17930
03400 DNA repair and recombination proteins [BR:
xve03400
]
BJD12_17930
Enzymes [BR:
xve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BJD12_17930
Transcription machinery [BR:
xve03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BJD12_17930
DNA repair and recombination proteins [BR:
xve03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BJD12_17930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
APP76796
UniProt:
F0BEU6
LinkDB
All DBs
Position
4118151..4119149
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AA seq
332 aa
AA seq
DB search
MTVTANQVLRPRGPQIERLTDNRAKVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVE
IDGVLHEYTTVEGLQEDVLDVLLNLKDVAIRMHSGDSATLSLSKQGPGTVTAADIRTDHN
VEIINGDHVICHLTKDTALNMRLKIERGFGYQPAAARRRPDEETRTIGRLMLDASFSPVR
RVAYAVEAARVEQRTDLDKLVIDIETNGTIDAEEAVRTAADILSDQLSVFGDFTHRDRGA
AKPAASGVDPVLLRPIDDLELTVRSANCLKAESIYYIGDLIQKTEVELLKTPNLGKKSLT
EIKEVLAQRGLALGMKLENWPPAGVAQHGMLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaccgccaaccaggttctgcgcccccgtggtccgcagatcgaacgtcttacc
gacaatcgcgcaaaggtcgtgatcgagcccttggagcgcggttacgggcacacgctgggc
aatgccctgcgtcgtgtgctgttgtcgtcgatccccggttttgcgatcaccgaggtcgag
atcgacggcgtgctgcacgagtacaccacggtcgaagggctgcaggaagacgtgcttgac
gtcctgctcaacctgaaagacgtggcgattcgtatgcacagtggcgacagcgcaacgctg
tcgttgtccaagcagggtccgggcacggtcactgcggccgacatcaggaccgatcacaac
gttgagatcatcaacggcgaccatgtgatctgccacctgaccaaagacaccgcactgaac
atgcgcctgaagatcgagcgtgggttcggctaccagccggccgccgcccgtcgtcgtccg
gacgaagagacccgcaccatcggtcgtctgatgctggatgcgtcgttctcgccagtgcgt
cgcgttgcctacgctgtggaagctgcgcgtgtcgaacagcgtaccgacctcgacaagctg
gtgatcgatatcgaaaccaacggcacgatcgatgccgaggaagccgtgcgcaccgccgcc
gacatcctcagcgatcagctgtcggtgttcggcgatttcacccaccgcgatcgcggtgcg
gccaagccggctgccagcggcgtggatccggtgctgctgcgcccgatcgacgaccttgag
ctgaccgtgcgttcggccaattgcctcaaggccgagagcatctactacatcggcgatctg
atccagaagaccgaagtggagctgctcaagaccccgaatctgggcaagaagtcgctgacc
gaaatcaaggaagtgctggcacagcgcggtcttgcgctgggcatgaagctggagaactgg
ccgccggccggtgttgcccagcacggcatgcttggttaa
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