Xanthomonas vesicatoria: BJD12_22710
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Entry
BJD12_22710 CDS
T04741
Name
(GenBank) hypothetical protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
xve
Xanthomonas vesicatoria
Pathway
xve03410
Base excision repair
xve03430
Mismatch repair
xve03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BJD12_22710
03430 Mismatch repair
BJD12_22710
03440 Homologous recombination
BJD12_22710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xve03400
]
BJD12_22710
DNA repair and recombination proteins [BR:
xve03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BJD12_22710
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BJD12_22710
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BJD12_22710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
APP78259
LinkDB
All DBs
Position
pLMG911.1:59836..61632
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AA seq
598 aa
AA seq
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MRKRSVDALILRSAERDGFTPLQARVIAGRMKAEDSGLSVRQRVLPRIADLDSYHQLPDI
DIAVDRICTAIQGREVIACVVDHDADGSTAGAVMLASLVDYFGMAQQDVLLFNSHRMKEG
YGVSNAVVDRILQHHPLPSLIITGDQGSADHDRITRMREEGIDTVVTDHHEIPARGIPQD
AVAVVNPARADSSFADKNVAGCHVAWLVMCAVRAELINRGHLPADAPRLGDLLDWVALGS
ACDAVSLSKSINNRALIAHGLKVMNARRRPAWEGMAVVLGKKDAYSAPDLAWKIGPRLNA
RSRLSEAMTGVQFLMSKDYDEAVRLATVLEEDNTTRRGIEKEMTATAMAIAALQASSDSP
AIVVCLENGHAGCHGITASRLTEALGRPTMMLSPKEGEMGVFTGSLRTAAGVNIKQAMDQ
VVEWEPGLLLSHGGHHGAGGLRVQAGNIHLLQELFCEAVLLQVHPSQLHPLIHTDGELDA
SPSLAMVDELAQLEPYGREFDPPVFHGQFQVLSARVIGADKTHIKLSLKDRYGGVTSAIW
FGAIKTSVFRPEPSEADVPVAAGDMVNAAYTLTSNTYRGNTSVDLQIKHARKASTSTS
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
attcgcaagcgctcggtcgatgcattgatcttgcgatccgcagagcgcgatgggttcacg
ccgctgcaggctcgtgtgattgccggccgcatgaaggctgaggatagtggtctgtccgtt
cgccagcgcgtgctgccacgcatcgctgatctagattcctatcatcagctgcctgacatc
gacatcgcggtggatcgcatctgcaccgcgatacaggggcgcgaagttattgcatgtgtg
gtcgatcatgacgcagacggcagtactgccggcgcagtgatgttggcctcgctggttgac
tattttggcatggcccagcaggacgtgctcctgttcaactcgcaccgcatgaaggaggga
tacggtgtcagcaacgccgtggtcgaccgcattctgcagcaccatcctcttccttcactc
atcatcaccggtgaccagggcagcgcggaccatgaccggataacgcgcatgagggaggag
ggcatcgacacggtggtgaccgaccatcatgaaattccggcacgcggcattccccaggac
gctgttgccgtggtcaatcccgctcgtgctgattccagctttgccgacaagaatgtggcc
ggttgccatgtggcgtggctggtcatgtgtgcagtgcgagccgagctgatcaatcgtggc
cacctgcctgctgatgcaccgcgcctgggcgacctactggactgggttgcgctgggtagt
gcctgcgacgcagtgagcttgtcgaaatcgatcaacaaccgcgcgctcatcgcgcacggg
ctgaaggtgatgaacgccaggcgtagacctgcgtgggaagggatggcggttgtgctgggt
aaaaaggatgcgtattcggcgcctgatttggcctggaagattggcccacgattgaatgcc
cgctcacgactgagtgaggccatgaccggtgtccaattcctgatgagcaaggactacgac
gaagcggtccggttggccaccgtcctggaagaagacaacacgactcgccgtggcatcgag
aaggagatgactgccactgcgatggcgatcgcggcgctgcaggcgagcagcgacagtcct
gccattgtcgtatgcctagagaacggtcacgcaggttgtcacgggataactgcgagcagg
ctcactgaagctctgggccgccccaccatgatgctctccccgaaagagggtgagatgggc
gtcttcacgggctcacttcgtaccgccgccggcgtgaacatcaagcaggccatggaccaa
gtggtcgaatgggagccgggcttgctgctatcgcatggcggccaccacggcgccggcgga
ttgcgggtgcaggcgggcaatatccatctgctgcaggagctgttctgcgaagcggtacta
ctgcaagttcatccatcgcaactgcatcccctgattcatacggacggggaattggacgcc
tcgccgtcgctggccatggttgatgagctggctcaactggagccctacggtcgcgagttc
gacccgcccgttttccatggccagttccaagttctcagtgcccgggtcatcggtgccgat
aagacgcacatcaagctcagcctgaaggatcgatacggcggtgtcacatcggccatctgg
ttcggggcgattaagacgtcagtgtttcgcccagagccttcggaagccgacgtgccagtt
gccgcaggcgatatggtcaatgccgcatacacgcttacctccaacacctatcgtggcaac
acctcggttgacctgcaaattaaacacgcccgaaaggcgtccacctctacgagttga
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