Xylanimonas protaetiae: ET471_05330
Help
Entry
ET471_05330 CDS
T05815
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
xya
Xylanimonas protaetiae
Brite
KEGG Orthology (KO) [BR:
xya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xya03032
]
ET471_05330 (gyrB)
03400 DNA repair and recombination proteins [BR:
xya03400
]
ET471_05330 (gyrB)
Enzymes [BR:
xya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ET471_05330 (gyrB)
DNA replication proteins [BR:
xya03032
]
Prokaryotic type
DNA Topoisomerases
ET471_05330 (gyrB)
DNA repair and recombination proteins [BR:
xya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ET471_05330 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
QAY69538
UniProt:
A0A4P6FG10
LinkDB
All DBs
Position
1185019..1187055
Genome browser
AA seq
678 aa
AA seq
DB search
MANRNDGGYDAGNITVLEGLEAVRKRPGMYIGSTGERGLHHLVYEVVDNSVDEALAGYAD
TIDVTLLADGGVRVVDNGRGIPVAVHPTEGKPTVEVVMTILHAGGKFGGGGYAVSGGLHG
VGISVVNALSTRVVSEIARDGYRWRMEFGGGGHPVGELQRLEPTEETGTTQTFWADPAIF
ETTEFDFETLRARFQQMAFLNKGLSITLTDERARHVVVEDEIVGEPEAPDADGVVVGDHD
DDPPVRTVTYRYDGGLTDYVKHLNAGKRVELIHPEVIDFEAEDTERKISLEIAMQWTSAY
SESVHTYANTISTTEGGTHEEGFRAAMTTLVNSYARDKGILKEKEDNLTGDDIREGLTAV
ISVKLGEPQFEGQTKTKLGNTEAKTFVQRVVREQLTDWFDSHPNEARDVIRKAIQASQAR
LAARKAREATRRKGLLSSGGMPGKLKDCQSNRPEECEIYIVEGDSAGGSAVRGRNPHNQA
ILPIRGKILNVERARLDKALSNQEVQSLITAFGTGIGEDFDASKLRYHKVILMADADVDG
QHIATLLLTLLFRYMRPLIEQGHVYLAMPPLFRLKWSNAPHDYVYSDKERDAFVREGLAA
GKRMPKDKGIQRYKGLGEMDYQELWETTMDPDHRTLRQVTMDDAAAADEVFSMLMGEDVE
SRRSFIQRNAKDVRFLDI
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaatcggaacgacggcggatacgacgccgggaacatcaccgtcctggaaggtctc
gaggccgtccgcaagcgcccgggcatgtacatcggctccaccggcgagcgcggcctgcac
cacctcgtctacgaggtggtcgacaactcggtcgacgaggccctcgccggctacgccgac
accatcgacgtgacgctcctcgccgacggcggcgtccgcgtcgtcgacaacggccgcggc
atccccgtcgccgtccaccccaccgagggcaagcccacggtcgaggtcgtcatgacgatc
ctccacgcgggcggcaagttcggcggcggcgggtacgccgtctcgggcggcctccacggc
gtcggcatctccgtcgtcaacgccctgtccacgcgcgtggtcagcgagatcgcgcgcgac
ggctaccgctggcgcatggagttcggcggcggcggccacccggtcggggagctccagcgc
ctcgagcccaccgaggagaccggcaccacccagaccttctgggccgacccggcgatcttc
gagaccaccgagttcgacttcgagacgctgcgcgcccgcttccagcagatggctttcctc
aacaagggcctgtcgatcacgctcaccgacgagcgcgcccgccacgtcgtcgtcgaggac
gagatcgtcggcgagcccgaggcgcccgacgcggacggcgtcgtcgtcggcgaccacgac
gacgacccccccgtccgcaccgtgacgtaccggtacgacggcggcctcaccgactacgtg
aagcacctcaacgcgggcaagcgcgtggagctcatccacccggaggtcatcgacttcgag
gcggaggacaccgagcgcaagatctcgctcgagatcgcgatgcagtggacgagcgcctac
agcgagtccgtgcacacgtacgcgaacaccatctcgaccaccgagggcggcacgcacgag
gagggcttccgcgcggcgatgaccacgctggtcaacagctacgcgcgcgacaagggcatc
ctcaaggagaaggaggacaacctcacgggcgacgacatccgcgagggcctgaccgccgtc
atctccgtcaagctcggcgagccgcagttcgagggccagaccaagacgaagctcggcaac
accgaggcgaagacgttcgtgcagcgcgtggtgcgcgagcagctcaccgactggttcgac
tcccacccgaacgaggcgcgcgacgtcatccgcaaggccatccaggcctcgcaggcccgg
ctcgcggcccgcaaggcgcgcgaggcgacccgtcgcaagggcctcctgagcagcggcggc
atgcccggcaagctcaaggactgccagtcgaaccgccccgaagagtgcgagatctacatc
gtcgagggcgactccgccggcggctccgcggtgcgcggacgcaacccgcacaaccaggcg
atcctgccgatccgagggaagatcctcaacgtcgagcgcgcccgtctcgacaaggcgctg
tcgaaccaggaggtccagagcctcatcaccgcgttcggcaccggcatcggcgaggacttc
gacgcctccaagctgcggtaccacaaggtgatcctcatggccgacgccgacgtcgacggc
cagcacatcgccacgctgctgctcacgctgctgttccgctacatgcgcccgctcatcgag
cagggccacgtgtacctggccatgccgccgctgttccggctcaagtggtcgaacgccccg
cacgactacgtgtactccgacaaggagcgcgacgcgttcgtgcgcgagggcctcgccgcc
ggcaagcggatgcccaaggacaagggcatccagcggtacaagggtctcggcgagatggac
taccaggagctctgggagaccaccatggaccctgaccaccgcaccctgcggcaggtcacc
atggacgacgccgccgcggccgacgaggtgttctccatgctcatgggcgaggacgtcgag
tcccgccgcagcttcatccagcgcaacgccaaggacgtccggttcctcgacatctga
DBGET
integrated database retrieval system
