Xylanimonas protaetiae: ET471_05655 Help Entry ET471_05655       CDS       T05815                                  Symbol hrpA Name (GenBank) ATP-dependent RNA helicase HrpA   KO K03578   ATP-dependent RNA helicase HrpA [EC:5.6.2.6] Organism xya  Xylanimonas protaetiae Brite KEGG Orthology (KO) [BR:xya00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:xya03019]     ET471_05655 (hrpA) Enzymes [BR:xya01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      ET471_05655 (hrpA) Messenger RNA biogenesis [BR:xya03019]  Prokaryotic type   Bacterial mRNA degradation factors    Other RNA degradation factors     Others      ET471_05655 (hrpA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DUF3418 OB_NTP_bind Helicase_C DEAD HA2_C AAA_22 HA2_N AAA_19 NACHT T2SSE ABC_tran nSTAND3 SLFN-g3_helicase Motif Other DBs NCBI-ProteinID:  QAY69588 UniProt:  A0A4P6FG65 LinkDB All DBs Position complement(1247920..1252395) Genome browser AA seq 1491 aa AA seqDB search MSTADPVPHPSSSPDDGRRRDGGRRRRGRRPGEGRQRGQARGPRRVSRAHLDKVAAARAA VVVPPITYPEQLPVSARRDDIAAAIRDHQVVVVAGETGSGKTTQLPKILLDLGRGRAGQI GHTQPRRIAARSVAERIAEELQTTLGEIVGYQVRFTDQSSEQTLVKVMTDGILLAQIQRD PELLAYDTIVIDEAHERSLNIDFLLGYLSRLLPRRPDLKVVITSATIDSERFAEHFSPSH LAALGGAPEAVVDVLPKAAPVVEVSGRTYPVEIRYRPLVPEAGENGLAKKGEEKDLVTGI VEACDELMRCGPGDILVFLSGEREIHDALDGLEGHLGARARDPKHPQHVEILPLYSRLSA AEQHRVFASHPGRRIVLSTNVAETSLTVPGIHYVVDTGLARISRYSKATKVQRLPIEAIS QASANQRSGRSGRVADGVAVRLYSQADFEARPEYTEPEILRTSLASVLLQMIAVGVVESP DEMARFPFVEKPDTRAVRDGVMLLRELGALASDDAGTRLTAVGRQLAQLPMDPRLARMIV EGARLGAAREVAVVAAALSVQDPRERPAEVRERADQLHSRFVDPTSDFLSYLNLWEYLRE QQRDLSGSAFRRLCKAEHLNFLRVREWQDVVAQLRQMSNDLGIDLSARGRGASRVAEPAE AREPHDEAQPRSGEWRRVWDGETIHRALLSGLLSQVGMQDTGEIKASSVAHLKGEARARA LRQQAKRARNEYLGARGARFAIFPGSPLSKKPPEWVMAGELVETSRLWGRDVARIQPEWA EALAGDLARRTYSDPHWSTKQGAAMATEKVLLYGVPIVADRPVLFAKVDPEAAREMFVRH ALVQGEWTTHHKFFADNRRTLEEAEQVEARSRQRGLVASEDDLFAFYDERVPASVVSARH FDQWWAAARRTTPDLLTFRLEDLVDVEAVDPSQFPSSWAQGEVTLPLTYQFSPGSDADGV TVHVPLSVLPRVSPSGFDWMVPGLLEELCVATIRSLPKAVRVQLVPAPDVGAGVAGWLRA STPAWEDMARAGDMAEPFHVAFTRAVRALRDVVVPDDAWDAERVERLPAHLRVTFRVVDL AGTTPAGGRGGRGTRGGGPGPGAAVDESKDLLALQRRLAPKAEAAVRAAVKGAVAVALEE AQRRDAASRQPAPAGASDATRRSAPRPAASRGTTGAIAERLGLTTWPDGLPGGRLPDVVS TDLGGGVVVRGYPALVAEPGPRQEPTVALRILADAVEQPGAHARGVRRLLLAENQLAAGR VTSRWSGTQALTLAASPYRNTNLLAEDLQLAAVIALTSPAAEVAPGIPASPVIAVQIRDA ESYNLVRAHVRRHLEDETHRVTGHVVAALTAWRTLESEIRTTSSLALLTTLQDIREHAAG LVYDGFVAATPPRRLPHLVRYLRAASYRLEKAQAAPHRDAELAWRIRDVEEAYAKAQAAY AAGPADAARAAELAEVRWQVEELRVSLFAQQLGTDGTVSEKRIRKTLAPTS NT seq 4476 nt NT seq  +upstreamnt  +downstreamnt gtgagcaccgcagaccccgtcccgcacccgtcgtcgtcgcccgacgacgggcggcgtcgc gacggcggacgtcgccgccgcgggcgacgccccggcgaggggcggcagcgtggccaggcc cgcggtccccgacgcgtgtcccgcgcccacctcgacaaggtcgccgcggcgcgggccgcc gtcgtcgtgccgcccatcacctacccggagcagctgccggtcagcgcgcggcgggacgac atcgccgcggcgatccgcgaccaccaggtcgtcgtcgtcgcgggcgagaccggctcgggc aagacgacgcagctgccgaagatcctgctggacctcgggcggggccgggccgggcagatc gggcacacgcagccgcggcgcatcgcggcacgcagcgtcgccgagcgcatcgccgaagag ctccagacgacgctcggcgagatcgtcggctaccaggtgcggttcacggaccagtcgagc gagcagacgctcgtcaaggtcatgaccgacggcatcctgctggcgcagatccagcgggac ccggagctgctggcctacgacaccatcgtgatcgacgaggcgcacgagcggtcgctcaac atcgacttcctgctcggctacctgtcccggctgctgccgcggcggccggacctcaaggtc gtgatcacgtccgcgacgatcgactcggagcggttcgcggagcacttctcgccgtcgcac ctcgccgccctgggcggggcgcccgaggccgtcgtcgacgtgctgccgaaggcggcgccc gtcgtcgaggtgtccgggcgcacgtacccggtggagatccgctaccgaccgctcgtcccg gaggccggggagaacgggctggcgaagaagggcgaggagaaggacctcgtcacgggcatc gtcgaggcctgcgacgagctcatgcgctgcgggcccggcgacatcctcgtgttcctctcg ggcgagcgggagatccacgacgcgctcgacggcctcgaagggcacctcggcgcgcgcgcc cgcgacccgaagcacccgcagcacgtcgagatcctgccgctctactcgcggctctcggcc gccgagcagcaccgcgtgttcgcgtcccaccccgggcggcgcatcgtcctgtcgaccaac gtcgccgagacgtcgctgaccgtgcccggcatccactacgtcgtcgacacgggcctcgcg cgcatctcgcgctactccaaggccaccaaggtgcagcgcctgcccatcgaggcgatctcg caggcctccgcgaaccagcgctccgggcgctccgggcgcgtggccgacggcgtcgccgtc cggctctactcgcaggccgacttcgaggcgcggccggagtacaccgagcccgagatcctg cggacgtcgctcgcgtccgtgctgctgcagatgatcgccgtcggcgtcgtcgagagcccg gacgagatggcgcggttcccattcgtcgagaagcccgacacgcgtgcggtccgcgacggc gtcatgctgctgcgcgagctcggggcgctggcgtcggacgacgccggcacgcgcctcacg gccgtcgggcgacagctcgcccagctgcccatggacccgcggctcgcgcgcatgatcgtc gagggcgcccgcctgggcgccgcccgcgaggtggcggtcgtcgccgccgccctctcggtg caggacccgcgcgagcgccccgccgaggtccgcgagcgcgccgaccagctgcactcgcgg ttcgtcgacccgacgtcggacttcctgtcgtacctgaacctgtgggagtacctgcgcgag cagcagcgcgacctgtcgggctccgcgttccgccggctgtgcaaggcggagcacctcaac ttcctgcgcgtgcgcgagtggcaggacgtcgtcgcacagctgcggcagatgtcgaacgac ctgggcatcgacctctccgcccgggggcgcggcgcgtcccgcgtggccgagcccgccgag gccagagagccgcacgacgaggcgcagccgcgcagcggcgagtggcggcgcgtctgggac ggggagaccatccaccgcgccctgctctccggcctcctctcgcaggtcggcatgcaggac acgggcgagatcaaggcctcctccgtcgcgcacctcaagggcgaggcacgggcccgcgcg ctgcggcagcaggccaagcgcgcgcgcaacgagtacctgggcgcgcgcggggcgcggttc gcgatcttccccggctctccgctgagcaagaagccgccggagtgggtcatggcgggcgag ctcgtcgagacgtcccgcctgtggggccgcgacgtcgcgcgcatccagcccgagtgggcc gaggcgctcgccggcgacctcgcgcgccgcacctactccgacccgcactggtccaccaag cagggcgccgcgatggccaccgagaaggtgctgctctacggcgtgccgatcgtggccgac cggcccgtgctgttcgccaaggtggaccccgaggcggcccgcgagatgttcgtccgccac gccctcgtgcagggcgagtggaccacgcaccacaagttcttcgccgacaaccggcgcacc ctggaggaggccgagcaggtcgaggcgcgctcccgccagcgcggcctggtcgcctcggag gacgacctgttcgcgttctacgacgagcgcgtccccgcgtccgtcgtcagcgcgcggcac ttcgaccagtggtgggccgccgcgcgccgcacgacgccggacctgctcacgttccgcctc gaggacctcgtcgacgtcgaggccgtggacccgtcgcagttcccgtcgtcgtgggcgcag ggcgaggtcacgctgccgctcacgtaccagttcagccccggctccgacgccgacggcgtc accgtgcacgtgcccctctccgtgctgccgcgcgtctcgccgtcggggttcgactggatg gtgcccgggctgctcgaggagctgtgcgtcgcgaccatccgctcgctgcccaaggccgtg cgcgtgcagctcgtgcccgcgcctgacgtcggcgcgggcgtcgccgggtggctgcgcgcg agcacgcccgcgtgggaggacatggcccgcgccggcgacatggccgagccgttccacgtc gcgttcacgcgcgcggtgcgcgcgctgcgggatgtggtggtgcccgacgacgcctgggac gccgagcgggtcgagcgcctgcccgcgcacctgcgggtcacgttccgcgtggtggacctc gcggggacgacgccggccggtggccgcgggggacgcggcacgcggggcggcggtcccggg cccggcgccgccgtggacgagtcgaaggacctgctcgcgctccagcgccgcctcgcgccg aaggccgaggccgcggtgcgggccgcggtcaagggcgcggtggcggtcgcactggaggag gcccagcgccgcgacgccgcctcccgccagccggcgcccgccggcgcctccgacgccacg cgtcgttctgcgccgcgtcctgcggcctcgcgcgggacgacgggggcgatcgccgagcgg ctcgggctcaccacctggcccgacggcctgcccggcggccgcctgcccgacgtcgtctcc accgacctgggcgggggtgtcgtcgtgcgcggctaccccgcgctcgtcgcggagcccggg cccaggcaggagcccacggtggcgctgcgcatcctcgccgacgccgtcgagcagcccggc gcgcacgcgcgcggcgtgcggcggctgctgctcgccgagaaccagctcgccgccggacgg gtgacgtcccggtggagcggcacgcaggcgctcacgctcgcggcgagcccgtaccggaac acgaacctgctggccgaggacctccagctcgcggcggtcatcgcgctgaccagccccgca gccgaggtcgcccccggcatcccggcgagccccgtcatcgccgtacagatccgagacgcc gagtcgtacaacctcgtcagggcgcacgtacgccgtcacctggaggacgagacccaccgg gtgacgggccatgtcgtcgcagccctcacggcctggcgcacgctcgagtcggagatccgc acgacgtcctccctggccctgctcaccacgctgcaggacatccgcgagcacgcggccggc ctggtctacgacgggttcgtcgcggcgaccccgccgcgacgcctcccgcacctggtgcgg tacctgcgcgcggcgtcgtaccggctggagaaggcgcaggcggccccgcaccgcgacgcc gagctcgcctggcgcatccgcgacgtggaggaggcgtacgcgaaggcgcaggccgcctac gcggccggtcccgccgacgcggcccgcgcggccgagctcgccgaggtgcgctggcaggtc gaggagctgcgcgtgagcctcttcgcgcagcagctcggcacggacggcacggtcagcgag aagcgcatccgcaagacgctggcccccacgtcctga

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