Xylanimonas protaetiae: ET471_08535
Help
Entry
ET471_08535 CDS
T05815
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
xya
Xylanimonas protaetiae
Pathway
xya03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xya00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ET471_08535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xya03021
]
ET471_08535
03400 DNA repair and recombination proteins [BR:
xya03400
]
ET471_08535
Enzymes [BR:
xya01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ET471_08535
Transcription machinery [BR:
xya03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ET471_08535
DNA repair and recombination proteins [BR:
xya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ET471_08535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QAY70076
UniProt:
A0A4P6F414
LinkDB
All DBs
Position
1853213..1857088
Genome browser
AA seq
1291 aa
AA seq
DB search
MLDVNVFDELRIGLATADDIRAWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIVCERCGVEVTRSKVRRERMGHIELAAPVTHIWFFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITWVDDEGRHEDLPRLQNEIDLEKKEIADRRDNDINARAVKLEAD
IAELEAEGAKADARRKVRDAAEREMANLRKRADADIERLENVWDRFKNLKVADLEGDEML
YRSLQDRYGTYFEGSMGANAIQKRLESFDLEAEADNLREIIRSGKGQRKTRALKRLKVVN
AFLTTTNSPTAMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPTLKLHQCGLPKQMALELFKPFVMKRLVELNHAQNIKSAKRMVERTR
SVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIHLHPLVCAAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPSDGRPVTMPSQDMIIGLHHLTSDRPGAVGEGR
VFSSQAEAIMAFDRGDLDINATVKIRMDDVVYEPGEEPEGWEPGQAELKETTLGRTVFNE
ALPVDYPYQNRVIGKKELSEIVNDLAESYPKVEVAASLDALKDAGYKWATRSGVTIAISD
VAMPAVKDEILDEHEARALKVQQQFDRGLITDDERRQELIEIWTQATDKVASVMRENLES
NARNTLYRMVSSGARGNWMQVRQIAGMRGLVANPKGEIIPRPIKSNYREGLSVLEYFIAS
HGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLTLPVGERLGDALVPHP
RVETSIYARTLAVDVTDADGNVIARGGEDAGDAEIEALLAAGVENVKVRSVLTCESRVGT
CAKCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASAEDITQGLPRVT
ELFEARTPKGEAPIAEYTGRLAIEDMERSRILVLTPDDGSEELRYQVSKRARLLVEDGQH
VTVGTQLVQGAVDPKKVLRILGPRAAQKHLVDEVQETYRSQGVDIHDKHIEVIVRQMLRR
VTVLDSGDTKLLPGELAERTRFEDANRGAVAEGGHPASGRPELMGITKASLATDSWLSAA
SFQETTRVLTEAAMSGRRDPLLGLKENVIIGKLIPAGTGLSRYGNIEVEPTEQAKAELYP
SFGYDEIDFPTLGMGSGEAIPLEDLDFGDFR
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgtcaacgtcttcgacgagctgcgtatcggcctggccacggccgacgacatc
cgtgcctggtcgcacggcgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
cccgagaaggacggcctcttctgcgagaagatcttcggcccgactcgcgactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcgtctgcgagcgctgcggtgtc
gaggtcacgcggtccaaggtgcgccgtgagcgcatgggccacatcgagctggccgccccg
gtcacgcacatctggttcttcaagggtgtgccgtcccgcctgggctacctgctcgacctc
gcgccgaaggacctggagaaggtcatctacttcgcggcctacatgatcacgtgggtcgac
gacgagggccgtcacgaggacctgccgcgtctccagaacgagatcgacctggagaagaag
gagatcgcggaccgccgcgacaacgacatcaacgcccgcgccgtcaagctcgaggcggac
atcgccgagctcgaggccgagggcgccaaggcggacgcgcgccgcaaggtgcgcgacgcc
gcggagcgcgagatggcgaacctgcgcaagcgcgcggacgccgacatcgagcgtctcgag
aacgtgtgggaccgcttcaagaacctcaaggtcgccgacctcgagggcgacgagatgctg
taccgctcgctccaggaccgctacggcacgtacttcgagggctcgatgggcgcgaacgcg
atccagaagcgtctcgagtcgtttgacctggaggccgaggccgacaacctgcgcgagatc
atccgcagcggcaagggccagcgcaagacccgcgccctcaagcgcctcaaggtcgtcaac
gcgttcctcacgacgacgaactcgcccaccgcgatggtgctcgacgccgtcccggtcatc
ccgccggacctgcgcccgatggtgcagctcgacggtggccgcttcgcgacgtcggacctg
aacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctgaagcgcctgctcgacctc
ggtgcgcccgagatcatcgtgaacaacgagaagcgcatgctccaggaggccgtcgactcg
ctgttcgacaacggtcgccgcggtcgtccggtgacgggcccgggcaaccgcccgctgaag
tccatctcggacatgctcaagggcaagcagggtcgtttccgccagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtcgtcggcccgaccctgaagctgcaccag
tgcggtctgcccaagcagatggcgctcgagctgttcaagccgttcgtgatgaagcgtctc
gtggagctcaaccacgcgcagaacatcaagtcggccaagcgcatggtcgagcgcacccgc
tcggtcgtgtgggacgtgctggaggaggtcatcaccgagcaccccgtgctgctcaaccgt
gcccccaccctgcaccgcctgggcatccaggcgttcgagccgcagctcgtcgagggcaag
gccatccacctgcacccgctcgtctgcgccgcgttcaacgcggacttcgacggcgaccag
atggccgtccacctgccgctgtccgccgaggcccaggccgaggcgcgcatcctcatgctc
tcgagcaacaacatcctcaagccgtcggacggccgtccggtgaccatgccctcgcaggac
atgatcatcggcctgcaccacctgacgtcggaccgcccgggcgccgtcggcgagggccgc
gtgttctcgtcgcaggccgaggcgatcatggcgttcgaccgcggcgacctggacatcaac
gcgaccgtcaagatccgcatggacgacgtcgtgtacgagccgggcgaggagcccgagggc
tgggagcccggtcaggccgagctcaaggagacgacgctgggccgcacggtcttcaacgag
gcgctccccgtcgactacccgtaccagaaccgggtgatcggcaagaaggagctctcggag
atcgtcaacgacctcgccgagtcgtacccgaaggtcgaggtcgcggcgtcgctcgacgcg
ctgaaggacgccggctacaagtgggcgacccgttcgggcgtcacgatcgccatctccgac
gtcgccatgccggctgtcaaggacgagatcctcgacgagcacgaggcgcgtgcgctcaag
gtgcagcagcagttcgaccgcggtctgatcaccgacgacgagcgccgtcaggagctcatc
gagatctggacccaggccaccgacaaggtcgcctcggtcatgcgcgagaacctcgagtcg
aacgcccgcaacaccctgtaccgcatggtgtcgtcgggtgcccgtggtaactggatgcag
gtccgccagatcgccggtatgcgcggcctcgtggcgaacccgaagggcgagatcatcccg
cgcccgatcaagtccaactaccgcgagggcctctcggtcctcgagtacttcatcgcgtcg
cacggtgcccgtaagggtctggccgacacggccctccgtacggccgactcgggctacctg
acccgtcgtctcgtggacgtctcgcaggacgtcatcatccgcgaggaggactgcggcacg
gagcgcggcctgacgctgcccgtgggcgagcgcctcggcgacgcgctggtgccgcacccc
cgcgtggagacgtcgatctacgcgcgcacgctggccgtggacgtcacggacgccgacggc
aacgtgatcgcccgtggtggcgaggacgccggcgacgccgagatcgaggcgctgctcgcg
gcgggcgtcgagaacgtcaaggtgcgctcggtgctcacctgcgagtcgcgtgtcggcacc
tgcgccaagtgctacggccgctccctggccacgggcaagctcgtggacatcggcgaggcc
gtcggcatcatcgcggcccagtcgatcggtgagccgggcacgcagctgacgatgcgtacg
ttccacaccggtggtgtcgcctcggccgaggacatcacgcagggtctgccccgcgtgacc
gagctcttcgaggcccgcacccccaagggtgaggcgcccatcgccgagtacaccggccgc
ctggcgatcgaggacatggagcgttcgcgcatcctggtcctcacgcccgacgacggctcg
gaggagctgcgctaccaggtgtcgaagcgtgcgcgcctgctggtcgaggacggccagcac
gtcacggtcggcacccagctggtgcagggtgcggtggacccgaagaaggtcctgcgcatc
ctcggcccgcgcgccgcgcagaagcacctggtggacgaggtccaggagacctaccgcagc
cagggcgtggacatccacgacaagcacatcgaggtcatcgtgcggcagatgctgcgtcgc
gtgaccgtgctcgactcgggtgacacgaagctgctgccgggcgagctcgcggagcgcacg
cgcttcgaggacgccaaccgcggcgccgtggcggagggtggccacccggcctccggtcgc
ccggagctcatgggcatcacgaaggcctcgctcgccaccgactcgtggctctcggccgcc
tccttccaggagacgacccgcgtgctcaccgaggcggccatgagcggccgtcgggacccg
ctgctgggcctcaaggagaacgtcatcatcggtaagctcatccccgccggaacgggcctg
tcccgctacgggaacatcgaggtcgagcccaccgagcaggccaaggccgagctctacccg
agcttcggctacgacgagatcgacttcccgacgctcggcatgggctcgggcgaggcgatc
ccgctcgaggacctggacttcggcgacttccgctga
DBGET
integrated database retrieval system
