Xylanimonas protaetiae: ET471_08705
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Entry
ET471_08705 CDS
T05815
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
xya
Xylanimonas protaetiae
Pathway
xya03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xya00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ET471_08705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xya03021
]
ET471_08705
03400 DNA repair and recombination proteins [BR:
xya03400
]
ET471_08705
Enzymes [BR:
xya01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ET471_08705
Transcription machinery [BR:
xya03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ET471_08705
DNA repair and recombination proteins [BR:
xya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ET471_08705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
QAY70110
UniProt:
A0A4P6F2P2
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All DBs
Position
1878073..1879080
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AA seq
335 aa
AA seq
DB search
MLIAQRPTLTEEVISEHRTRFAIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTEIILNIKNLVVSSENDEPVVMYLRKQGAGAVTAADIVPPAGVEVHN
PDLHIATLNEKGKLEIELTVERGRGYVSAAQNKSLDAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKPAITPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPTD
SALAADLALPIEELNLTIRSYNCLKREGIHQVGELVARSEADLLDIRNFGAKSINEVKEK
LAELGLALKDSPLDFDPSAAFYDGGDDAAYDEQSY
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtgctgatcgcacagcgccccaccctgaccgaagaggtcatctcggagcaccgcacccgg
tttgccatcgagccgctggagcccggcttcggctacacgctcggcaactcgctgcgccgc
accctgctgtcgtccatcccgggcgcggccgtcacctccatccgcatcgacggtgtgctc
cacgagttcaccaccgtgccgggggtgaaggaggacgtcaccgagatcatcctcaacatc
aagaacctggtcgtctcctcggagaacgacgagccggtcgtcatgtacctgcgcaagcag
ggtgccggggccgtcaccgccgcggacatcgtcccgccggcgggcgtcgaggtgcacaac
cccgacctgcacatcgccacgctcaacgagaagggcaagctcgagatcgagctgaccgtc
gagcgcggtcgtggctacgtctccgcggcgcagaacaagtcgctggacgccgagatcggc
cgcatcccggtcgactcgatctactcgccggtcctcaaggtcacgtacaaggtcgaggcc
acccgtgtggagcagcgcacggacttcgacaagctgatcgtcgacgtcgagaccaagccg
gccatcacgccgcgcgacgctctcgcctccgccggcaagacgctcgtcgagctgttcggc
ctggcccgcgagctgaacgtcgaggccgagggcatcgagatcggcccgtcgccgacggac
tccgcgctggccgcggacctggcgctgccgatcgaggagctcaacctcacgatccgctcg
tacaactgcctcaagcgcgagggcatccaccaggtcggtgagctcgtcgcgcgcagcgag
gcggacctgctcgacatccgcaacttcggtgcgaagtcgatcaacgaggtcaaggagaag
ctggccgagctcggcctggcgctcaaggactcgccgctcgacttcgacccgtccgccgcg
ttctacgacggtggcgacgacgcggcctacgacgagcagtcgtactga
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