Xylanimonas protaetiae: ET471_08805
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Entry
ET471_08805 CDS
T05815
Name
(GenBank) pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
xya
Xylanimonas protaetiae
Brite
KEGG Orthology (KO) [BR:
xya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xya03009
]
ET471_08805
03016 Transfer RNA biogenesis [BR:
xya03016
]
ET471_08805
Enzymes [BR:
xya01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
ET471_08805
5.4.99.29 23S rRNA pseudouridine746 synthase
ET471_08805
Ribosome biogenesis [BR:
xya03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ET471_08805
Transfer RNA biogenesis [BR:
xya03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
ET471_08805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QAY70128
UniProt:
A0A4P6FHM5
LinkDB
All DBs
Position
1896967..1897905
Genome browser
AA seq
312 aa
AA seq
DB search
MPFPPLPVRDGLNPTRLVLPHDAASVARWGTAVEYLVGRFPDDSERLLEKVAAGEVVTGR
GVRVDVDTPYEPRGFLFLYRDPPADEPRVPALDDVAVLHRDENLLVVDKPHLVATMPRGR
WVTQTVLVHLRRTLDLPELAPAHRLDRPTAGVLVLTVRARVRGAYQDLFQERRVRKVYEA
VAPLPPDGLTFPTTVRSRIVKHRGIAAAQEELGEPNAESLVDLVARDDARGLGLYRLEPH
TGKTHQLRLHLASLGLPILHDPFWPVLLPDAEADPARPLQLLSRSLTFTDPFTGEHRTFA
SRRMLAEWQVRG
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgcccttccccccgcttcccgtgcgcgacggcctcaacccgacgcggctcgtgctcccg
cacgacgccgcgtccgtggcgcgctggggcaccgccgtcgagtacctggtgggccgcttc
ccggacgactccgagcggctgctcgagaaggtcgcggccggggaggtggtcacgggccgc
ggcgtccgggtcgacgtcgacaccccgtacgagccgcgcggcttcctgttcctgtaccgc
gacccgcccgccgacgagccgcgcgtccccgcgctcgacgacgtcgcggtgctgcaccgc
gacgagaacctgctggtggtcgacaagccgcacctggtcgcgacgatgccgcgcgggcgc
tgggtcacgcagaccgtgctcgtccacctgcgccgcacgctcgacctgccggagctggcg
ccggcccaccgcctcgaccgcccgacggcgggggtgctggtgctgaccgtgcgggcccgc
gtgcgcggcgcctaccaggacctgttccaggagcgacgggtccgcaaggtgtacgaggcg
gtagcaccgctgccgcccgacggcctgacgttcccgacgacggtgcgctcccgcatcgtc
aagcaccgggggatcgccgcagcccaggaggagctcggggagcccaacgcggagtcgctg
gtcgacctggtcgcgcgggacgacgcgcgcgggctcggcctctaccgcctggagccgcac
accggcaagacgcaccagctccgcctgcacctggcctcgctcgggctgcccatccttcac
gacccgttctggcccgtcctgctcccggacgccgaggcggacccggcccgcccgctccag
ctcctgtcgaggtcgctcaccttcaccgaccccttcaccggcgagcaccgcaccttcgcg
tcccgccggatgctcgcggaatggcaggtgagaggatga
DBGET
integrated database retrieval system
