Xylanimonas protaetiae: ET471_10835
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Entry
ET471_10835 CDS
T05815
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xya
Xylanimonas protaetiae
Brite
KEGG Orthology (KO) [BR:
xya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xya03032
]
ET471_10835
03400 DNA repair and recombination proteins [BR:
xya03400
]
ET471_10835
Enzymes [BR:
xya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ET471_10835
DNA replication proteins [BR:
xya03032
]
Prokaryotic type
DNA Topoisomerases
ET471_10835
DNA repair and recombination proteins [BR:
xya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ET471_10835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
QAY70461
UniProt:
A0A4V0YG98
LinkDB
All DBs
Position
complement(2352432..2353412)
Genome browser
AA seq
326 aa
AA seq
DB search
MSRLRRVSASEPGFGRRRAGRGWTYLDVGGAPLRDEDALARCRRLAIPPAWRDVWICPYP
NGHLQAFGRDEAGRGQYLYHEDWTARRRRRKHDHVLEVGVRLPGARRRVTRALAEPGMGS
EKVLALAFRLLDLAYFRAGGEVYAAKHQSYGLATIRKEHAVVSRDGTVRFRYPAKSGQVR
DVVVDDPVVAGLVAVLKRRRGGTDLLAWRDGDGAWHDVTSADVQTAVKEQLGPDATPKDF
RTWHATVLAARALADAGPAPRSARARRHGVAEVVRDVAEDLGNTPAVARASYIDPRLVDL
WAHGETIGPTRTHAAAERAVLRLLGP
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtctgcgccgcgtctccgcctcggagccggggttcgggcggcgtcgcgcgggc
cgcggctggacgtacctcgacgtcggcggcgccccgctgcgcgacgaggacgcgctggca
cgctgccgccggctggcgatccccccggcgtggcgggacgtgtggatctgcccatacccg
aacggccacctccaggcgttcgggcgcgacgaggccggacgcggccagtacctgtaccac
gaggactggaccgcgcggcgccggcgccgcaagcacgaccacgtgctcgaggtcggcgtg
cggctgcccggcgcccggcgccgcgtcacccgagcgctcgccgaacccgggatggggtcc
gagaaggtgctggccctcgcgttccgcctgctcgacctcgcgtacttccgcgcgggcggc
gaggtctacgccgccaagcaccagagctacggcctggcgaccatccgcaaggagcacgcg
gtggtgagccgggacgggaccgtccggttccggtatcccgccaagagcgggcaggtgcgc
gacgtcgtggtggacgacccggtggtcgccgggctcgtcgcggtgctcaagcggcgccgc
ggcggcaccgacctgctcgcgtggcgcgacggcgacggcgcgtggcacgacgtgaccagc
gccgacgtgcagacggccgtcaaggagcagctcggacccgacgcgacgcccaaggacttc
cgcacctggcacgcgacggtgctcgcggcgagggcgctcgcggacgccggacccgcaccg
cgctcggcccgcgcgcgccggcacggcgtcgccgaggtggtgcgcgacgtcgccgaggac
ctgggcaacaccccggccgtggcgcgggcgtcctacatcgacccccgcctggtggacctg
tgggcgcacggcgagacgatcgggccgacccgcacgcacgcggccgccgagcgtgccgtg
ctgcggctgctcggcccgtga
DBGET
integrated database retrieval system
