KEGG   Xylanimonas protaetiae: ET471_15730
Entry
ET471_15730       CDS       T05815                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
xya  Xylanimonas protaetiae
Pathway
xya02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:xya00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    ET471_15730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xya03021]
    ET471_15730
Transcription machinery [BR:xya03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ET471_15730
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 CDC27
Other DBs
NCBI-ProteinID: QAY71299
UniProt: A0A4P6FAI7
LinkDB
Position
complement(3384825..3386465)
AA seq 546 aa
MPKGRFVASTSQSTAQQNITLPREFEHPGLKELLARGTAEGRVDAESFRTACEAAGVGDA
KRLKAVLKALSLAGVEVGMPTVSKVAAATTTRSTSARAKAPATRTKAAPKPAETTDAETT
DAAETAPAKKAAPVRKTAAKAPAKKAGATKAAKSDEGEDDVEVIEDDVEIDETELEDVEV
TDDPEETTTDDAAEEGEEKPATDKPAEKDEDDDKGFVVSDSDDDDQPVQQVVTAGATADP
VKDYLKQIGKVALLNAEQEVELAKRIEAGLFAEEKLSKEFADFDKTKADADTRRLVRDLQ
WISHDGKRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGYK
FSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELAKE
LDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAVVPADAVSFTLLQEQLHQ
VLDTLSEREAGVVSMRFGLQDGQPKTLDEIGKVYGVTRERIRQIESKTMSKLRHPSRSQV
LRDYLD
NT seq 1641 nt   +upstreamnt  +downstreamnt
atgccgaaaggtcggtttgtggcgtccacgtcccagagcaccgcacagcagaacatcacg
ctgccccgcgagttcgagcaccctggtctgaaggagctcctcgcacgtggcacggccgag
ggccgcgtcgacgccgagtccttccgcacggcgtgcgaggctgcgggcgtcggcgacgcc
aagcgcctcaaggcggtcctcaaggcgctgtcgctcgcgggcgtcgaggtgggcatgccg
accgtctcgaaggtcgccgccgcgacgacgacccgttcgacgtcggcgcgcgccaaggcg
cccgccacccgcacgaaggcggcccccaagccggccgagaccaccgacgccgagaccacc
gacgccgccgagacggccccggccaagaaggccgcgcccgtccgcaagaccgcagccaag
gctcccgcgaagaaggccggtgccaccaaggctgccaagtccgacgagggcgaggacgac
gtcgaggtcatcgaggacgacgtcgagatcgacgagaccgagctcgaggacgtcgaggtg
accgacgaccccgaggagacgacgaccgacgacgcggccgaggagggcgaggagaagccc
gccaccgacaagcccgccgagaaggacgaggacgacgacaagggcttcgtcgtctccgac
tccgacgacgacgaccagcccgtccagcaggtcgtcacggccggcgcgacggccgacccg
gtcaaggactacctcaagcagatcggcaaggtcgcgctgctgaacgccgagcaggaggtc
gagctcgccaagcgcatcgaggccggcctgttcgccgaggagaagctctccaaggagttc
gccgacttcgacaagaccaaggcggacgccgacacgcgtcgcctggtgcgcgacctgcag
tggatctcccacgacggcaagcgcgccaagaaccacctcctcgaggcgaacctgcgactc
gtcgtctcgctcgccaagcgctacacgggccgcggcatgctcttcctggacctcatccag
gagggcaacctcggtctgatccgcgcggtcgagaagttcgactacaccaagggctacaag
ttctcgacgtacgccacctggtggatccgtcaggccatcacgcgcgccatggccgaccag
gcccgcaccatccgcatcccggtgcacatggtggaggtcatcaacaagctggcccgcgtg
cagcgccagatgctccaggacctgggccgcgagcccacgccggaggagctggccaaggag
ctggacatgacccccgagaaggtggtcgaggtccagaagtacggccgcgagcccatctcg
ctgcacacgccgctcggcgaggacggcgactcggagttcggtgacctcatcgaggactcc
gaggccgtggtcccggccgacgccgtgtcgttcacgctgctccaggagcagctgcaccag
gtgctcgacacgctctcggagcgcgaggccggcgtggtctcgatgcggttcggcctgcag
gacggccagcccaagacgctcgacgagatcggcaaggtctacggcgtgacgcgcgagcgc
atccgccagatcgagtccaagacgatgtcgaagctgcgccacccgtcgcgctcgcaggtg
ctgcgcgactacctggactga

DBGET integrated database retrieval system