Xylanimonas protaetiae: ET471_15730
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Entry
ET471_15730 CDS
T05815
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
xya
Xylanimonas protaetiae
Pathway
xya02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
xya00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ET471_15730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xya03021
]
ET471_15730
Transcription machinery [BR:
xya03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ET471_15730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
CDC27
Motif
Other DBs
NCBI-ProteinID:
QAY71299
UniProt:
A0A4P6FAI7
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All DBs
Position
complement(3384825..3386465)
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AA seq
546 aa
AA seq
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MPKGRFVASTSQSTAQQNITLPREFEHPGLKELLARGTAEGRVDAESFRTACEAAGVGDA
KRLKAVLKALSLAGVEVGMPTVSKVAAATTTRSTSARAKAPATRTKAAPKPAETTDAETT
DAAETAPAKKAAPVRKTAAKAPAKKAGATKAAKSDEGEDDVEVIEDDVEIDETELEDVEV
TDDPEETTTDDAAEEGEEKPATDKPAEKDEDDDKGFVVSDSDDDDQPVQQVVTAGATADP
VKDYLKQIGKVALLNAEQEVELAKRIEAGLFAEEKLSKEFADFDKTKADADTRRLVRDLQ
WISHDGKRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGYK
FSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELAKE
LDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAVVPADAVSFTLLQEQLHQ
VLDTLSEREAGVVSMRFGLQDGQPKTLDEIGKVYGVTRERIRQIESKTMSKLRHPSRSQV
LRDYLD
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaggtcggtttgtggcgtccacgtcccagagcaccgcacagcagaacatcacg
ctgccccgcgagttcgagcaccctggtctgaaggagctcctcgcacgtggcacggccgag
ggccgcgtcgacgccgagtccttccgcacggcgtgcgaggctgcgggcgtcggcgacgcc
aagcgcctcaaggcggtcctcaaggcgctgtcgctcgcgggcgtcgaggtgggcatgccg
accgtctcgaaggtcgccgccgcgacgacgacccgttcgacgtcggcgcgcgccaaggcg
cccgccacccgcacgaaggcggcccccaagccggccgagaccaccgacgccgagaccacc
gacgccgccgagacggccccggccaagaaggccgcgcccgtccgcaagaccgcagccaag
gctcccgcgaagaaggccggtgccaccaaggctgccaagtccgacgagggcgaggacgac
gtcgaggtcatcgaggacgacgtcgagatcgacgagaccgagctcgaggacgtcgaggtg
accgacgaccccgaggagacgacgaccgacgacgcggccgaggagggcgaggagaagccc
gccaccgacaagcccgccgagaaggacgaggacgacgacaagggcttcgtcgtctccgac
tccgacgacgacgaccagcccgtccagcaggtcgtcacggccggcgcgacggccgacccg
gtcaaggactacctcaagcagatcggcaaggtcgcgctgctgaacgccgagcaggaggtc
gagctcgccaagcgcatcgaggccggcctgttcgccgaggagaagctctccaaggagttc
gccgacttcgacaagaccaaggcggacgccgacacgcgtcgcctggtgcgcgacctgcag
tggatctcccacgacggcaagcgcgccaagaaccacctcctcgaggcgaacctgcgactc
gtcgtctcgctcgccaagcgctacacgggccgcggcatgctcttcctggacctcatccag
gagggcaacctcggtctgatccgcgcggtcgagaagttcgactacaccaagggctacaag
ttctcgacgtacgccacctggtggatccgtcaggccatcacgcgcgccatggccgaccag
gcccgcaccatccgcatcccggtgcacatggtggaggtcatcaacaagctggcccgcgtg
cagcgccagatgctccaggacctgggccgcgagcccacgccggaggagctggccaaggag
ctggacatgacccccgagaaggtggtcgaggtccagaagtacggccgcgagcccatctcg
ctgcacacgccgctcggcgaggacggcgactcggagttcggtgacctcatcgaggactcc
gaggccgtggtcccggccgacgccgtgtcgttcacgctgctccaggagcagctgcaccag
gtgctcgacacgctctcggagcgcgaggccggcgtggtctcgatgcggttcggcctgcag
gacggccagcccaagacgctcgacgagatcggcaaggtctacggcgtgacgcgcgagcgc
atccgccagatcgagtccaagacgatgtcgaagctgcgccacccgtcgcgctcgcaggtg
ctgcgcgactacctggactga
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