Xylanimonas protaetiae: ET471_16910
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Entry
ET471_16910 CDS
T05815
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
xya
Xylanimonas protaetiae
Pathway
xya03030
DNA replication
xya03430
Mismatch repair
xya03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ET471_16910 (holA)
03430 Mismatch repair
ET471_16910 (holA)
03440 Homologous recombination
ET471_16910 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xya03032
]
ET471_16910 (holA)
03400 DNA repair and recombination proteins [BR:
xya03400
]
ET471_16910 (holA)
Enzymes [BR:
xya01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ET471_16910 (holA)
DNA replication proteins [BR:
xya03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ET471_16910 (holA)
DNA repair and recombination proteins [BR:
xya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ET471_16910 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
HTLV1ZIPPER
Motif
Other DBs
NCBI-ProteinID:
QAY71501
UniProt:
A0A4V0YGK2
LinkDB
All DBs
Position
complement(3636005..3637033)
Genome browser
AA seq
342 aa
AA seq
DB search
MPPATRARAGARKPAGNVRAWDEPTLAPVVLVRGPEDLLRERAVDGLVGLARERDPETEK
VELDGTTYGAGQLQVAASPSLFGEAKIVVVTAADAGTDELYADLLDHVARPDPETTVVVV
HGSGQRGKKMLDAIVASGSPVLQCDAVTRDADKAEFVARELRTARRRAEPEAVRALVDAL
GTDLRELASAVSQLVADTSGTISAGVVDRYYGGRVEATGFKVADAAVAGDAGGAVALLRH
ALDTGADPVPLVAALAMRLRTLAKVAALRGGAVTARELGLQDWQVRNAQRDLQRWTPEGL
ATAISAVAQADAEVKGEGRDPVFAVEKAVLTIARTVRPSGRR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcccgccacccgcgcccgcgccggcgcccgcaagcccgcaggcaacgtccgcgcc
tgggacgagcccacgctcgcgcccgtcgtgctggtgcgcggcccggaggacctgctgcgc
gagcgggccgtcgacgggctcgtgggcctggcccgggagcgggaccccgagaccgagaag
gtcgagctcgacggcaccacctacggcgcgggccagctccaggtcgcggccagcccgtcg
ctgttcggcgaggccaagatcgtcgtggtcacggccgccgacgccggcaccgacgagctg
tacgccgacctgctcgaccacgtcgcgcgcccggacccggagaccaccgtcgtcgtcgtg
cacggcagcgggcagcgtggcaagaagatgctcgacgcgatcgtcgcgtccgggtcgccc
gtcctccagtgcgacgccgtcacgcgcgacgccgacaaggccgagttcgtcgcgcgcgag
ctccgcaccgcccggcgtcgcgccgagcccgaggccgtgcgggccctcgtcgacgcgctc
ggcaccgacctgcgcgagctcgcctccgccgtgtcgcagctcgtcgccgacacctccggc
acgatcagcgcaggcgtcgtcgaccgctactacggcggccgggtcgaggccaccggtttc
aaggtggccgacgccgccgtcgccggggacgccggcggtgcggtcgccctgctgcggcac
gcgctggacacgggtgccgaccccgtgccgctcgtcgcggcgctggccatgcgcctgcgg
accctcgccaaggtggccgcgctgcgcggcggcgccgtcaccgcgcgcgagctgggcctg
caggactggcaggtgcgcaacgcccagcgcgacctgcagcgctggaccccggagggcctc
gcgaccgcgatcagcgccgtcgcgcaggccgacgccgaggtcaagggcgagggccgcgac
ccggtgttcgccgtcgagaaggccgtgctcacgatcgcgcgcacggtccggccgtcgggt
cgccgctga
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