Xylophilus sp. GOD-11R: R9X41_00855 Help Entry R9X41_00855       CDS       T09600                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism xyg  Xylophilus sp. GOD-11R Pathway xyg02020   Two-component system xyg02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:xyg00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     R9X41_00855  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     R9X41_00855  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:xyg03021]     R9X41_00855 Transcription machinery [BR:xyg03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      R9X41_00855 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38 HTH_IclR HTH_5 HTH_23 Motif Other DBs NCBI-ProteinID:  WPB57238 LinkDB All DBs Position 179284..180855 Genome browser AA seq 523 aa AA seqDB search MKQGLSLRVSQHLALTPQLQQSIRLLQLSTLELSQEVEQMLDENPFLEVTHEEAAREEFG VAQADTPATAAEEEGFYAGAENTASTATTSEASGDGDGDGGVESEPSWEGDGGTEVVADD GEWGGDAPARQNNLGEDGEVDATELARSQESLTAFLHRQALALRLSPEDSAALRFLIESL NDDGYLEDSLPSLALGLAGHGDDAMEEVEDLVQRFTVALRLLQHLEPAGVGARDLRECLT LQLRAMRETGVGQPALVAAALAICAHPMELLARRDVKRLTAACNLDEETVRAAMGLIARL EPKPGRRFVDVERNIVIPDVLVQKIGRGPQPRFRVQLNPDVMPRLKVHDIYASALKQHKG EGSAALQQRLQEARWFIKNIQQRFDTILRVSNAIVERQKNFFVHGELAMRPLVLREIADE LGLHESTISRVTTAKYMSTPFGTFELKYFFGSALGTETGGNASSTAVRALIKQFVSSEDL RKPLSDSQISDMLKEQGIECARRTVAKYRDALRIAPANLRKSL NT seq 1572 nt NT seq  +upstreamnt  +downstreamnt ttgaaacaagggctttctcttcgcgtttcgcagcatctggcgctcacgccgcagctgcag cagtcgatccggctgctgcagctgtcgacgctggagctgagccaggaggtcgagcagatg ctcgacgagaaccctttcctcgaagtcacccacgaggaagccgcgcgcgaggaattcggc gtggcgcaggccgacacgcctgcgacggcggcggaagaggaaggcttctacgccggcgcc gagaacaccgccagcaccgccaccactagcgaagcctcgggcgacggcgacggtgacggt ggtgtcgaatccgagcccagctgggaaggcgacggcggcaccgaagtcgtcgccgacgac ggcgaatggggcggcgacgcgcccgcccgccagaacaacctgggcgaagacggcgaggtc gacgccaccgaactggcgcgcagccaggagtcgctcaccgccttcctgcaccgacaggcg ctggccctgcgcctgtcgcccgaagacagcgcggcgctgcgattcctgatcgaatcgctc aacgacgacggctacctggaggactcgctgccgtcgctggccctgggcctcgccggccac ggcgacgacgcgatggaggaggtcgaggacctggttcagcgctttaccgtcgccctgcgc ctgctgcaacacctggagcccgccggcgtcggcgcgcgcgatctgcgcgaatgtctcacg ctgcaattgcgcgctatgcgcgaaaccggcgtcggacagccggcgctggtcgccgccgca ctggcgatctgcgcgcatcccatggaattgctggcccgccgcgacgtcaagcgcctgacg gccgcctgcaacctcgacgaggaaaccgtgcgcgcggccatgggcctgatcgcccggctc gaacccaagcccggccggcgtttcgtcgatgtcgaacgcaacatcgtcataccggacgtg ctggtgcaaaagatcggccgcggaccgcaaccgcgctttcgcgtacagctcaaccccgac gtgatgccgcgcctgaaggtgcacgacatctacgccagcgcgctcaagcagcacaagggc gaaggcagcgccgccctgcagcagcggctgcaggaagcgcgctggttcatcaagaacatc cagcagcgcttcgacaccatcctgcgggtgtccaacgccatcgtcgagcggcagaagaac ttcttcgtgcacggcgaactggccatgcgaccgctggtgctgcgcgagatcgccgatgaa ctcggcctgcacgaatccaccatcagccgggtgaccacggccaagtacatgtcgacgccc ttcggcactttcgagctcaagtacttcttcggctccgctctgggcaccgaaaccggcggc aacgcgtcaagcaccgcggtgcgggcgctgatcaagcagttcgtcagctcggaagacctg cgcaagccgctgtcggacagccagatctccgacatgctcaaggagcagggcatcgaatgc gcgcgccgcacggtggccaagtaccgtgacgcgctgcgcatcgcaccggccaatctgcgc aagtcgctttga

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