Xylophilus sp. GOD-11R: R9X41_01175
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Entry
R9X41_01175 CDS
T09600
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
xyg
Xylophilus sp. GOD-11R
Brite
KEGG Orthology (KO) [BR:
xyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xyg03009
]
R9X41_01175 (rsmB)
Enzymes [BR:
xyg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
R9X41_01175 (rsmB)
Ribosome biogenesis [BR:
xyg03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
R9X41_01175 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
FtsJ
Cons_hypoth95
Methyltransf_12
Methyltransf_15
Methyltransf_24
Methyltr_RsmF_N
Motif
Other DBs
NCBI-ProteinID:
WPB57294
LinkDB
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Position
249444..250835
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AA seq
463 aa
AA seq
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MNPSSSVPSSPVSSSSSLSPELWQQLQQVAEVLAAVRGGRSAPVALEAVPVALRPGVRAL
VFQVLRVLGRAEALRRKLATRTPPPLPDALLCAALALIWRQADAPYESFTLVDQAVEAAK
RNPAIRPQSGFINACLRRFLREQEALVAATDSEPLAAWNHPRWWIERLKRDHPRQWQEIL
RADNSHAPMTLRVNRLKTTREAVLRRFEASNLRAEPVGDWGIVLGHPLPVDQIPGFAEGE
VSVQDAAAQIAAPLLLDGMDLRQPLQVLDACAAPGGKTAHLVEFAGRDAPLSVTALDIDP
QRCERIHQTLARLGIEDRVQVLAADAQEPARWWPQHRDRELFDAILLDAPCTASGIVRRQ
PDVRWLRRESDIAQLAIIQAGLLTRLWPLLRPGGRLLYCTCSVFRDEGEHQIEAFLAHNT
DAVLLPSPGHLLPRDAAMTMGVGDNLPGDHDGFFHALLHKRGP
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgtcttcttccgtgccttcatctcccgtttcctcttcttcttctctttctccc
gaactctggcaacagctgcagcaggtggccgaagtgctggcggccgtgcgtgggggccgc
tccgcgccggtcgcgctcgaagcggtaccggtggcgctgcggcccggcgtacgcgcgctg
gtgttccaggtgctgcgggtgctgggccgggccgaagccttgcgtcgcaagcttgccacc
cgtacgccgccgccgctgcccgacgccttgctgtgcgccgcattggccctgatctggcgc
caggccgatgcgccctacgaatccttcacgctggtcgaccaggcggtcgaggctgccaag
cgcaaccccgcgattcgaccccagtccggcttcatcaacgcctgcctgcgacgtttcctg
cgtgagcaggaagcgctggtcgccgccaccgactccgaaccactggccgcgtggaaccat
ccgcgctggtggatcgagcggctcaagcgtgaccacccgcggcagtggcaggagatcctg
cgcgccgacaactcccacgcgcccatgaccctgcgcgtcaaccggctcaagaccacccgc
gaggcggtgttgcgccggttcgaagcgtccaacctgcgagccgagcccgtgggcgactgg
ggcatcgtgctggggcatccgctgccggtggaccagattcccggattcgccgaaggcgag
gtgtcggtgcaggatgcagccgcgcagattgctgcgccgctgctgctcgacggcatggat
ctgcggcaaccgctgcaggtgctcgacgcctgcgccgcccccggtggcaagaccgcccat
ctggtcgagttcgccggccgggatgcgccgttgtcggtcaccgcgctcgacatcgacccc
cagcgctgcgagcgcatccaccagaccctggcgcgcctgggtatcgaagaccgggtgcag
gtgctcgccgccgacgcccaggagcccgcacgctggtggccgcagcaccgtgaccgcgaa
cttttcgatgccatcctgctcgacgcaccctgcactgcctccggcatcgtgcggcgccag
ccggacgtgcgctggctgcgccgcgagagcgatatcgcccagctggccatcatccaggcc
ggtttgctgactcgtctctggcccttgttgcgccccggcggacgactgctctactgcacc
tgttcggtgtttcgcgacgagggcgagcaccagatcgaagcgtttcttgcgcacaacacc
gacgcggttttactgccatcgcccggccatttgcttccgcgcgatgccgccatgacgatg
ggtgtcggggacaatctgccgggtgaccacgacggcttcttccacgccctgctccacaaa
cgtggcccctga
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