Xylophilus sp. GOD-11R: R9X41_02630
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Entry
R9X41_02630 CDS
T09600
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
xyg
Xylophilus sp. GOD-11R
Pathway
xyg00300
Lysine biosynthesis
xyg00470
D-Amino acid metabolism
xyg01100
Metabolic pathways
xyg01110
Biosynthesis of secondary metabolites
xyg01120
Microbial metabolism in diverse environments
xyg01230
Biosynthesis of amino acids
Module
xyg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xyg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
R9X41_02630 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
R9X41_02630 (lysA)
Enzymes [BR:
xyg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
R9X41_02630 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WPB57573
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Position
complement(571088..572371)
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AA seq
427 aa
AA seq
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MIPSPLPGAPQLAYRGDALHLEDVSLSDLATVHGTPLYVYSKASMLAALGAYQRGFARRD
VQICYAMKANSTLGVLQVFARAGCGFDIVSAGELRRVLAAGGDASKVIFSGVGKTRAEMR
EALAAGIGCFNVESEAEIDVLDEVARAVGGTAPVSIRVNPNVDPKTHPYISTGLKDNKFG
IAHERAVAVYRHAASLPGLKVVGIDCHIGSQITDETPYLDAMDRVLDLVAAIEAAGIPLH
HIDFGGGLGIDYRGDKPPSADALWKRLLAKLDARGYGGRKLLVEPGRSLVGNAGVCLTEV
LYDKPGEHKNFCIVDAAMNDLPRPAMYEAYHAIVPLVLPAADAPIVTVDVVGPVCESGDW
LGRDRQLAVRPGDRLAVLSAGAYCMSMASNYNSRGRGAEVLVDGAASHLIRARESAEDQM
RGEKLPG
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgattccctcccccctgccgggcgcgccgcagctcgcctaccgcggcgacgcgctccat
ctcgaagacgtctcgctgtccgacctggccaccgtccacggcacgccgctctacgtctat
tccaaggcctcgatgctggccgcgctcggcgcctaccagcgcggctttgcccgccgcgat
gtgcagatctgctatgcgatgaaggccaactccacgctcggcgtgctgcaggtcttcgcc
cgcgcgggctgcggtttcgacatcgtgtcggccggtgaactgcggcgcgtgctggccgcc
ggcggcgatgcgtccaaggtgatcttctccggcgttggcaagacccgcgccgagatgcgc
gaggcgctggccgcgggcatcggctgcttcaacgtcgagagcgaagccgaaatcgacgtg
ctcgatgaagtcgcccgcgccgtcggcgggaccgcgccggtgagcatccgggtcaatccg
aacgtcgaccccaagacgcatccttatatttccaccggcctcaaggacaacaagttcggc
atcgcgcacgaacgggcggtggcggtctatcgccacgccgcgtcgctgccgggactgaaa
gtggtcggcatcgactgccatatcggttcgcagatcaccgacgagacgccctacctcgac
gccatggaccgggtgctcgacctggtcgcggccatcgaggcggccggcattcccctgcac
cacatcgacttcggcggcggcctgggcatcgactaccggggcgacaaacctccgtcggcc
gacgccctctggaagcgcctgctggccaagctcgacgcccgcggttatggcgggcgcaag
ctgctggtcgaacccggccgctcgttggtgggcaatgccggcgtctgcctgaccgaggtg
ctctacgacaagccgggtgagcacaagaacttctgcatcgtcgatgccgccatgaacgac
ctgccccggcccgccatgtacgaggcctatcacgccatcgtgccgctggtgctgccggcg
gccgacgcgcccatcgttacggtcgacgtggtggggccggtctgcgagagcggcgactgg
ctgggccgcgaccggcagctggcggtgcgccccggcgaccggctggcggtgctgtcggcc
ggcgcctattgcatgagcatggccagcaactacaactcgcgcgggcggggcgccgaggtg
ctggtcgacggcgcggcctcgcacctgatccgcgcccgcgaaagcgccgaagaccagatg
cgcggcgagaagctgcccggctga
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