Xylophilus sp. GOD-11R: R9X41_04405
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Entry
R9X41_04405 CDS
T09600
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
xyg
Xylophilus sp. GOD-11R
Brite
KEGG Orthology (KO) [BR:
xyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xyg03009
]
R9X41_04405
Enzymes [BR:
xyg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
R9X41_04405
Ribosome biogenesis [BR:
xyg03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
R9X41_04405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
WPB57894
LinkDB
All DBs
Position
947643..948389
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AA seq
248 aa
AA seq
DB search
MQLQDILFSQGFGTRRVCAGLIQQGLVAIGQGSDAIVLTDGTHDANPEGLHLRVQGRDWQ
VHAKAYLMLHKPAGTECSQKPSTYPSIYTLLPAPLRQRPSKSAVQGVQAIGRLDQDTTGL
LLLSDDGQFIHRMASPKHHLPKVYEVTTKHALEDQQVSRLLAGVVLDDDPRPVAAAACEI
VGEAGVSCHLRLTLTQGKYHQVKRMLAAVGNRVEGLHRSRIGALELPADLAPGQWRWLQP
EDLSLLKA
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttcaggacattcttttcagccaggggttcggcacccgacgtgtctgcgcaggg
ctgatccaacaaggccttgtggcgatagggcagggcagcgatgccatcgtgcttaccgac
ggcacccacgacgcgaaccccgaaggcctgcacctgcgggttcaggggcgcgactggcaa
gtgcatgccaaggcctacctgatgttgcacaagccggcgggcaccgagtgttcgcagaag
ccgtcgacctatcccagcatctacacccttttgccggcaccactgcgccagcgtccgtcc
aagagcgcggtgcagggcgtgcaggcgattggccggctcgaccaggacacgaccggcctg
ctcctgctgtccgacgacggccagttcatccaccgcatggcctcgcccaagcaccacctg
cccaaggtgtacgaggtcacgaccaagcatgcgctggaagaccagcaggtgagccgtctg
ctggccggcgtggtgctggacgacgacccccggccggtagccgccgcagcctgcgaaatc
gtcggcgaggcgggtgtgtcctgccatcttcgcctgacgctgacgcagggcaagtaccac
caggtcaaacgcatgctggccgccgtgggaaaccgggtcgaggggctgcaccgctcgcgc
atcggcgcactggaactgccggccgatctcgcgccgggccagtggcgttggctgcagccc
gaagatctaagtctgctgaaggcgtga
DBGET
integrated database retrieval system
