KEGG   Xylophilus sp. GOD-11R: R9X41_05085
Entry
R9X41_05085       CDS       T09600                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
xyg  Xylophilus sp. GOD-11R
Brite
KEGG Orthology (KO) [BR:xyg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xyg03032]
    R9X41_05085
   03036 Chromosome and associated proteins [BR:xyg03036]
    R9X41_05085
   03400 DNA repair and recombination proteins [BR:xyg03400]
    R9X41_05085
DNA replication proteins [BR:xyg03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    R9X41_05085
Chromosome and associated proteins [BR:xyg03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    R9X41_05085
DNA repair and recombination proteins [BR:xyg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      R9X41_05085
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 UBA_HYPK HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: WPB58020
LinkDB
Position
1109877..1110149
AA seq 90 aa
MNKTELIEHIAKNADISKAAATRALESTIGAVKTTLKKGGTVSLVGFGTFAVGKRAARSG
RNPRTGAAIKIKAAKVPKFRPGKALKDALN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaacaagaccgaactgatcgagcacatcgccaagaacgccgacatttccaaggcagcc
gctacccgcgcgctggaatccaccatcggcgccgtcaagaccacattgaagaaaggcggc
acggtctcgctcgtcggtttcggaaccttcgccgttggcaagcgtgcagcccgcagcggc
cgtaatccgcgcactggtgccgcgatcaagatcaaggctgctaaagtaccgaagttccgt
ccgggcaaggccctgaaggatgccctgaattga

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