KEGG   Xylophilus sp. GOD-11R: R9X41_05425
Entry
R9X41_05425       CDS       T09600                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
xyg  Xylophilus sp. GOD-11R
Pathway
xyg00521  Streptomycin biosynthesis
xyg00523  Polyketide sugar unit biosynthesis
xyg00525  Acarbose and validamycin biosynthesis
xyg00541  O-Antigen nucleotide sugar biosynthesis
xyg01100  Metabolic pathways
xyg01110  Biosynthesis of secondary metabolites
xyg01250  Biosynthesis of nucleotide sugars
Module
xyg_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:xyg00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    R9X41_05425 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    R9X41_05425 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    R9X41_05425 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    R9X41_05425 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    R9X41_05425 (rfbB)
Enzymes [BR:xyg01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     R9X41_05425 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 3Beta_HSD NAD_binding_4 adh_short
Other DBs
NCBI-ProteinID: WPB58081
LinkDB
Position
1193427..1194503
AA seq 358 aa
MILVTGGAGFIGSNFVLDWLAAGDEGVVNVDKLTYAGNLQNLQAVASHPGHVFVQADICD
AGVLARLLAEHQPRAVVNFAAESHVDRSIVGPAAFIETNVVGTFRLLEATRAYWSELPEA
ERAAFRFLHVSTDEVYGTLSKDDPAFAETKAYEPNSPYSASKAASDHLVRAWHHTYGLPV
LTTNCSNNYGPFHFPEKLIPLMIVNALAGKPLPVYGDGMQVRDWLYVKDHCAAIRRVLEA
GTLGETYNVGGWNEMPNIEIVKRVCALLDELRPRADGASYIGQLTYVKDRPGHDRRYAID
ARKIERELGWKPAETFDTGIRKTVEWYLANGEWLHNVQSGGYRDWVAAQYDNAKEATA
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgattctggtcaccggcggagcgggtttcataggctccaatttcgtcctggactggctg
gcggcaggcgacgaaggcgtggtcaacgtcgacaagctgacctacgccggcaacctgcaa
aacctccaggccgtcgcctcgcatccgggccacgtcttcgtgcaggccgatatctgcgac
gccggtgtgctggcccgcctgctggccgagcaccagccccgcgcggtggtcaatttcgcg
gccgaatcgcatgtcgaccgctccatcgtcggcccggcagcgttcatcgagaccaacgtg
gtcggcacctttcgcctgctcgaagccacccgcgcctactggtccgaactgcccgaggcc
gaacgcgccgccttccgctttctgcacgtgtccaccgacgaggtctacggcacgctgtcc
aaggacgacccggccttcgccgagaccaaggcctacgagcccaacagcccgtattcggcc
agcaaggccgccagcgatcacctggtgcgcgcctggcaccacacctacggcctgccggtg
ctcaccaccaattgctccaacaactatgggcccttccatttcccggagaagctgatcccg
ctgatgatcgtcaacgccctggccggcaagccgctgccggtgtatggcgacggcatgcag
gtgcgcgactggctctatgtcaaggaccactgcgccgccatccgccgcgtgctcgaggcc
ggaaccctgggcgagacctacaacgtgggcggctggaacgagatgcccaacatcgagatc
gtgaagcgtgtctgcgccttgctcgacgaactgcgcccgcgcgccgacggcgcctcctac
atcggccagctcacctacgtgaaggaccgcccgggccacgaccgccgctacgccatcgac
gcccgcaagatcgagcgcgaactcggctggaagccggccgaaactttcgacaccggcatc
cgcaagacggtcgagtggtatctcgccaacggggaatggctgcacaacgtgcagagcggc
ggctaccgcgactgggtcgccgcgcagtacgacaacgccaaagaagccaccgcatga

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