Xylophilus sp. GOD-11R: R9X41_05890
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Entry
R9X41_05890 CDS
T09600
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
xyg
Xylophilus sp. GOD-11R
Brite
KEGG Orthology (KO) [BR:
xyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xyg03036
]
R9X41_05890 (xerD)
Chromosome and associated proteins [BR:
xyg03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
R9X41_05890 (xerD)
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Ortholog
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_M
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
WPB58168
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Position
1291643..1292557
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AA seq
304 aa
AA seq
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MNCPVAPQNRLRIDAFVDAMWLEDGLSPNTLAAYRRDLTGYVVWLDAAMPGVRIDATAEH
HLQAYMAAQFGTSKPSTANRRLTVLRRYFHWAMREGAVQRDPTLRLLPAKGPVRSPATLS
EAQVEALLQAPDTTTALGLRDRAMLELLYASGLRVSELIGVRLFEVSMNDGVVRVTGKGS
KERLVPFGEVARDWLVRYLSGSRPELLAGRQSDDLFVTAREGAAMQRMNFWLIVRRYALA
AGIHTKLSPHTVRHAFATHLLNHGADLRSVQLLLGHADISTTTIYTHVARERLKTLHGAH
HPRG
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaattgcccggtcgcgccacaaaatcgactccgcatcgacgccttcgtggacgccatg
tggctggaggacggcctgtcgcccaacaccctggccgcctaccgccgggacctgacgggt
tacgtcgtctggcttgatgccgccatgcccggcgtacgtatcgacgccaccgccgagcat
cacctgcaggcctacatggccgcgcagttcggcaccagcaagccgagcaccgcgaatcgt
cgtctgacggtgctgcgccggtatttccactgggcgatgcgcgaaggcgccgtgcagcgc
gacccgacattgcggctgctgccggccaaggggccggttcgctccccggcgaccttgtcg
gaagcgcaggtcgaggcactgctccaggcgcccgacaccaccaccgcgctgggcctgcgc
gaccgcgcgatgctggaattgctctacgcgagcggcctgcgggtgagcgagctgatcggg
gtgcggctgttcgaggtctcgatgaacgacggcgtggtgcgggtgaccggcaagggatcc
aaggagcggctggtgcctttcggcgaggtcgcgcgcgactggctggtgcgctatctctcc
ggctcgcggcccgagctgctggccggtcggcagagcgacgatctcttcgtcacggccagg
gagggggctgccatgcagcgcatgaacttctggctgatcgtgcgccgttatgccctggcc
gctggcattcacaccaagctgtcgccgcatacggtgagacatgcctttgccacccacctg
ctcaaccacggcgccgacctgcgctcggtgcagttgctgctcggccatgccgacatctcg
accacgaccatctacacccatgtggcacgggaacgcttgaagacgctgcacggcgcccac
catccgcgcggctga
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