Xylophilus sp. GOD-11R: R9X41_06175
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Entry
R9X41_06175 CDS
T09600
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
xyg
Xylophilus sp. GOD-11R
Pathway
xyg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
R9X41_06175 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xyg03400
]
R9X41_06175 (xseA)
Enzymes [BR:
xyg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
R9X41_06175 (xseA)
DNA repair and recombination proteins [BR:
xyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
R9X41_06175 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WPB58224
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All DBs
Position
1356734..1358029
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AA seq
431 aa
AA seq
DB search
MNFSAATGSVPAPRVWAVGALCRAIADALDARFNPVSVRGEISGFSRAASGHCYFSLKDA
TGQIRGAMFRRVAQMIDFSPRDGELVEVRGRLGVYEARGDLQLIAESMSRVGQGGLYEQF
LQRKAKLEAEGLFDAERKRPLPSMPRHIGVVTSLGAAALHDVLSALARRAPHVSVTVSPA
SVQGAGAPAELVAALSALAHRPAPPDLILLVRGGGSIEDLWAFNDEALARAIAASPIPVI
SGVGHETDFTIADFVADLRAPTPTAAAELAAPQHTMLLRTLDLATEALEAAVMRRLDRHG
QRLDTLAARLSRPSAIVATQRLRLERHGQSMAHAVSAQIARARRGCDNAEVALPAAVRSG
IDRQRQRLERAELRLRMLDPGLVLQRGYAFLEDALGGTVTSVGQTHAGQRLQATLADGTV
ALTVDPPPAKD
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttcagcagctaccggctccgttcccgcaccccgcgtctgggccgtcggcgcg
ctttgccgggccatcgccgatgcgctcgacgcgcgcttcaacccggtgtcggtgcgcggc
gagatcagcggtttttcgcgagcggccagcggtcactgctacttttcgctgaaggacgcg
accggccagatccgcggcgcgatgttccgccgcgtggcgcagatgatcgacttctcgccg
cgcgacggtgagctggtcgaggtgcgcggcaggctgggggtgtacgaggcgcggggcgac
ctgcagctgatcgcggaatcgatgtcgcgggtggggcagggcgggctgtacgagcagttc
ctgcagcgcaaggccaagctcgaagccgaggggcttttcgatgcggagcgcaagcggccc
ctgccctcgatgccgcgccacatcggcgtggtgacctcgctcggcgcggcggcactgcac
gacgtactgagcgcgctggcgcggcgtgcgccgcatgtgtcggtgacggtgtcgccagcg
tcggtgcagggcgcgggcgcgccggccgagctggtggcggcgctgtccgcgctggcgcat
cggcctgcgccgccggacctgatcctgctggtgcgcggcggtggatcgatcgaagacctc
tgggccttcaacgacgaggcgctggcccgcgccatcgcggcgagcccgattccggtgatc
agcggcgtcggtcacgaaaccgacttcaccatcgccgatttcgtcgccgacctgcgcgcg
cccacgcccaccgccgcggccgagctcgcggcgccgcagcacaccatgctgttgcgtacg
ctcgacctggccaccgaggccctcgaagccgccgtcatgcgccgcctagaccgccacggc
cagcggctcgacaccctggccgcgcgcctgtcgcggccctcggccatcgtcgccacgcag
cggctgcggctggagcgccatggccagtcgatggcgcatgcggtgagcgcacagatcgcc
cgcgcgcgccggggttgcgacaacgccgaggtggctctgccggcagcggtgcggtccggt
atcgaccgccagcgacagcgcctggagcgggccgagctgcggctgcgcatgctcgatccc
ggcctggtgctgcagcgtggctatgccttcctggaagacgccttaggcggcaccgtcacc
agcgtcggccagacccacgccggccagcggctgcaggccacgctcgccgacggcaccgtg
gcgctgaccgtcgatccaccgcctgcgaaggattga
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