Xylophilus sp. GOD-11R: R9X41_07345
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Entry
R9X41_07345 CDS
T09600
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
xyg
Xylophilus sp. GOD-11R
Pathway
xyg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R9X41_07345 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xyg03400
]
R9X41_07345 (uvrB)
DNA repair and recombination proteins [BR:
xyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R9X41_07345 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
R9X41_07345 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_16
AAA_22
Kinesin
Motif
Other DBs
NCBI-ProteinID:
WPB58448
LinkDB
All DBs
Position
1589968..1592115
Genome browser
AA seq
715 aa
AA seq
DB search
MPISAADPVDSATPPSGDTPGTFIRYEGSPFELYQPYPPAGDQPTAIEKLVEGVNDGEVF
QTLLGVTGSGKTFTMANVIARLGRPAIVFAPNKTLAAQLYAEFREFFPKNAVEYFVSYYD
YYQPEAYVPQRDLFIEKDSAINEHIEQMRLSATKSVLERRDVVIVATVSAIYGIGAPEDY
TQMRFILRVGGKQGQRDAIAQLIRMQYTRNEQDFARGTFRVRGDTIDVFPAEHSELAVRI
ELFDDEVESLQLFDPLTGRVLQKVPRFVIYPASHYVTPRDKVLTAVEAIKEELRQRLAQF
VSDGKLVEAQRLEQRTRFDLEMLAEVGHCKGIENYSRHLSGSPPGAPPATLTDYLPKDAV
MFLDESHVMIGQLGGMYNGDRARKTTLVEYGFRLPSALDNRPLKFDEFETRMRQVIFVSA
TPADYEKRNAGQVVEQVVRPTGLVDPIVEVRPATHQVDDVLQEIRIRVEKNERVLITTLT
KRMAEQLTDYLSDNGVKVRYLHSDIDTVERVEILRDLRLGTFDVLVGINLLREGLDIPEV
SLVAILDADKEGFLRAERSLIQTIGRAARNLHGRAILYADKVTDSMRKAIGETERRREKQ
IAHNAEHGIVPRSVVKQVRELIDGVYGDKNGRDAVSADAGARGGAVLEDLSEKDLAREIK
RLEKQMLEHARNLEFEKAARLRDQLAQLKSRAFGAPGHDNVVAFPTPGSADSRPK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgcccatctccgccgccgatcccgtcgattccgccacaccgccgtcgggtgatacgccc
ggcacgttcatccgctacgagggctcgcccttcgagctctaccagccgtatccgccggcg
ggcgaccagcccacggccatcgagaaactggtggaaggcgtgaacgacggcgaggtgttc
cagaccctgctcggcgtgaccggctcgggcaagaccttcaccatggccaacgtcatcgcc
cgactgggacggccggcgatcgtcttcgcgccgaacaagacgctggcggcgcagctgtac
gccgagtttcgcgagttcttcccgaagaacgcagtggagtatttcgtcagctactacgat
tactaccagcccgaggcctacgtgccgcagcgcgatctgttcatcgagaaggacagcgcg
atcaacgagcacatcgagcagatgcggctgtcggccaccaagagcgtgctggagcggcgc
gacgtggtgatcgtggcgacggtcagcgccatctacggtatcggcgcaccggaggactac
acccagatgcgcttcatcttgcgcgtgggcggcaagcagggccagcgcgacgcgatcgcg
cagctgatccgcatgcagtacacccgcaacgagcaggatttcgcgcgcggcaccttccgg
gtacgcggcgacaccatcgacgtgtttccggcggagcattcggagctggccgtgcgcatc
gagctgttcgacgacgaggtggagtcgctgcagttgttcgatccgctcaccggccgggtg
ctgcagaaggtgccgcgcttcgtgatctatcccgcgagccactacgtgaccccgcgcgac
aaggtgctgacggcggtcgaggccatcaaggaagagttgcgccagcggctggcgcagttc
gtgtccgacggcaagctggtggaggcgcagcggctggagcagcgcactcggttcgacctg
gagatgctcgccgaggtcggccactgcaagggcatcgagaactactcgcggcacctgtcg
ggctcgccgccgggcgcaccgccggccacgctcaccgactatctgcccaaggacgcggtg
atgttcctcgacgagagccacgtcatgatcggccagctcggcggcatgtacaacggcgac
cgggcgcgcaagaccacgctggtcgagtatggttttcgcctgccgtctgcgctggacaac
cggccgctgaagttcgacgaattcgagacccgcatgcgccaggtgatcttcgtgtcggcc
acgcctgccgactacgaaaagcgcaacgccggccaggtggtggagcaggtggtgcggccg
accggcctggtcgacccgatcgtggaagtgcgcccggccacgcaccaggtcgacgacgtg
ctgcaggagatccgcatccgtgtcgagaagaacgagcgggtgctgatcaccacgctgacc
aaacgcatggccgagcagctgaccgactacctcagcgacaacggcgtgaaggtgcgctac
ctgcacagcgacatcgacacggtggagcgggtggagatattgcgcgacctgcgcctgggc
accttcgacgtgctggtgggcatcaacctgctgcgagaagggctggacattccggaagtg
agcctggtggcgatcctggatgccgacaaggaaggcttcctgcgcgccgagcgaagcctg
atccagacgatcggccgggccgcgcgcaacctgcatggccgcgccatcctgtatgccgac
aaggtgaccgattcgatgcgcaaggccatcggcgagaccgagcgcaggcgcgaaaagcag
atcgcccacaacgccgagcacggcatcgtgccgcgcagtgtggtcaagcaggtgcgcgag
ctgatcgacggcgtgtacggcgacaagaacggccgcgacgcggtgtccgccgatgccgga
gcacgcggtggcgcggtgctggaggacctgtccgaaaaggatctggcgcgcgagatcaag
cggctcgaaaagcagatgctcgaacacgcccgcaacctggaattcgagaaggccgcccgc
ctgcgcgaccagctcgcccagctcaagtcgcgtgccttcggtgcacccggtcacgacaac
gtggtggcgtttcctacgcccgggtcagccgattcccgaccaaagtag
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