Xylophilus sp. GOD-11R: R9X41_07535
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Entry
R9X41_07535 CDS
T09600
Name
(GenBank) Ada metal-binding domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
xyg
Xylophilus sp. GOD-11R
Pathway
xyg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R9X41_07535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xyg03000
]
R9X41_07535
03400 DNA repair and recombination proteins [BR:
xyg03400
]
R9X41_07535
Enzymes [BR:
xyg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
R9X41_07535
Transcription factors [BR:
xyg03000
]
Prokaryotic type
Helix-turn-helix
AraC family
R9X41_07535
DNA repair and recombination proteins [BR:
xyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
R9X41_07535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HhH-GPD
HTH_AraC
RecR_HhH
Inovirus_capsid
Motif
Other DBs
NCBI-ProteinID:
WPB58484
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All DBs
Position
complement(1636057..1637622)
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AA seq
521 aa
AA seq
DB search
MDSASSTAATTALPTDTEGCWRALASHDARFDGRFFTGVTSTGIYCRPVCRVRTPRLENC
RFFALAAQAEQAGFRPCLRCRPELAPSPGGAAAWSMQDAGSLLAHAAAAWLDDPLNWSDE
AGAALQARLADHLGVTDRHLRRVFLAAFGVTALQYLQTRRLLSAKQLLTDTRLPVSTVAQ
AAGFASQRRFNAAFLEHYRLSPTALRREGSSATDTGTATIRLPWRAPYDAAGIMAFFGKR
AVTGLETLVADEQVAGRSWLTRTLALGNARGWLQITLDTNAHQALLRVGERLAPALPALI
RRVRAMLDLDADPAAIDAVLLPHFPGSAGGRVPGALDGFELAVRAILGQQVTVAAAHTIC
GRLVVRYGEPIETPFPGVDRLFPTPAALALADGDVLGGLGIVRQRQAAIVALAREVDAGR
LALRPGDAPEPAMAALRALPGIGDWTAQYIAMRALRWPDAFPAGDVALQKALGVRGAAKP
AQAAIDASQAWRPWRSYAVLRAWHGTPEATISTPAEQETTP
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggattccgcctcctccaccgctgcgactaccgccctgcccaccgataccgaaggctgc
tggcgcgcgctggcatcgcacgacgcgcgtttcgacggccgcttcttcaccggcgtgacc
agcaccggcatctactgtcgaccggtttgccgggtgcgcacgccgcgcctggagaactgc
cgcttcttcgcgctcgcggcgcaggccgagcaggcgggttttcggccctgcctgcgctgc
cggccggagctggcgccatcgccgggcggcgcggctgcctggtcgatgcaggacgccggc
agcctgctggcacacgccgccgcggcctggctggacgatccgctgaactggagcgacgag
gctggcgcggcattgcaggcccgcttggccgatcacctcggcgtgaccgaccggcacctg
cgccgcgtctttctggctgcattcggcgtgaccgccctgcaatacctgcaaacccgccgg
ctgctgtcggccaagcaattgctgaccgatacccggctgccggtcagcaccgtcgcgcag
gccgccggcttcgccagccagcgtcgcttcaacgcggcctttctcgaacactaccgcctg
agcccgaccgcgctgcgccgcgaaggcagcagcgccaccgacaccggcacggcgaccatc
cgcctgccctggcgcgcgccctacgacgcggccggcatcatggccttcttcggcaaacgc
gcagtgaccggtctcgaaacgctggtggccgacgagcaggtcgccggcaggagctggctg
acccgcaccctggccctgggcaacgcgcgcggctggttgcagatcacgttggacacaaac
gcccaccaggcgctgctgcgggtgggggaacgcctggcgccggcgctgcccgcgctgatc
cgccgggtgcgcgccatgctcgacctcgatgccgaccccgccgccatcgacgctgtactg
ctgccgcattttccgggcagcgccggtggccgggtgccgggcgcgctcgacggattcgag
ctggcggtgcgggcgatcctgggccagcaggtcaccgtggcagccgcgcacaccatctgc
ggccgactggtggtgcgctacggcgagccgatcgaaacgcccttccccggcgtcgaccgc
ctgttccccacgcccgccgcgctggcgctggccgacggcgacgtcctgggcgggctcggc
atcgtgcggcagcggcaggcggccatcgtcgccctggcacgcgaggtcgacgccgggcgt
ctcgccctgcgaccgggcgacgcgccggagcccgccatggccgccctgcgcgccctgccc
ggcatcggcgactggaccgcgcaatacatcgcgatgcgcgccctgcgctggcccgacgcc
tttccggccggcgacgtggcgctgcagaaagcgctcggcgtacgcggcgccgccaagccg
gcgcaagccgccatcgacgcctcgcaggcctggcggccctggcgcagctacgccgtgttg
cgcgcctggcacggcacgcccgaagcgacaatctccaccccggccgaacaggagacgacc
ccatga
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