Xylophilus sp. GOD-11R: R9X41_08660
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Entry
R9X41_08660 CDS
T09600
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
xyg
Xylophilus sp. GOD-11R
Pathway
xyg00220
Arginine biosynthesis
xyg00240
Pyrimidine metabolism
xyg00250
Alanine, aspartate and glutamate metabolism
xyg01100
Metabolic pathways
xyg01110
Biosynthesis of secondary metabolites
xyg01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
xyg00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
R9X41_08660 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
R9X41_08660 (carB)
00220 Arginine biosynthesis
R9X41_08660 (carB)
Enzymes [BR:
xyg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
R9X41_08660 (carB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATPgrasp_Ter
Dala_Dala_lig_C
ATP-grasp_4
ATP-grasp_3
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
WPB58692
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Position
1844759..1848004
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AA seq
1081 aa
AA seq
DB search
MPKRSDLKSILIIGAGPIVIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPAT
ADVTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCALDLWHHGVLDKYEVELIGATP
EAIDKAEDRLKFKDAMTKIGLGSARSGIAHSMDEAWSVQKGLGFPTVIRPSFTLGGTGGG
IAYNAEEFEVICKRGLEASPTNELLIEESLLGWKEYEMEVVRDKADNCIIVCSIENLDPM
GVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPKDGRMVVIEM
NPRVSRSSALASKATGFPIAKVAAKLAIGYTLDELRNDITGGATPASFEPSIDYVVTKIP
RFAFEKFPTADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDGMNEKTQDREVLE
KELGEPGPERIWYVGDAFAQGMSVDEVFALTKIDPWFLVQIEEIVKIELELDQLAIDKGD
AALAALDATTLRTLKSKGFSDRRLAKLLKTSEKAVREARRALKVRPVYKRVDTCAAEFAT
NTAYMYSTYEDECEADPTDNKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMV
NCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALGLEAEGV
PIIGTTPDMIDAAEDRERFQKLLHELGLRQPPNATARTEPEALEKAAALGYPLVVRPSYV
LGGRAMEIVHEQRDLERYMREAVKVSNDSPVLLDRFLNDAIECDVDCIRDNTGATFIGGV
MEHIEQAGVHSGDSACSLPPYYLSAATVDELKRQSAAMAGALNVVGLMNVQFAIQEVDGQ
DVIYVLEVNPRASRTVPFVSKATGVQLAKVAARCMAGQSLASQGITKEVTPPYFSVKEAV
FPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQLGAGTKLPREGKVFLTVKNNDK
PRTVEVARQLVQLGFSLVATKGTAGAISAAGIPVEVVNKVTEGRPHVVDMIKNNEIVMVV
NTVEERRNAISDSRQIRTSSLLARVTTFTTISGAEAAVEGLAHVDGLGVISVQEMHAQLT
A
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcgttcagatctcaaatccattctcatcatcggcgccggcccgatcgtcatc
ggtcaggcctgcgagttcgactactccggcgtgcaggcctgcaaggcgctgcgggaagag
ggctacaaggtcatcctgatcaacagcaatcccgcgacgatcatgaccgacccggccact
gccgacgtgacctacatcgagccgatcacctggcagacggtcgagaagatcatcgccaag
gaacgtcccgacgcgatcctgcccaccatgggcggccagaccgcgctgaactgcgcgctc
gacctgtggcaccacggcgtgctcgacaagtacgaggtggaactgatcggcgcgacgccc
gaagccatcgacaaggccgaggaccgcctgaagttcaaggacgcgatgaccaagatcggc
ctgggctcggcgcgctcgggcatcgcccattccatggacgaggcctggtcggtgcagaag
ggcctgggcttcccgacggtcatccgccccagcttcacgctgggcggcaccggcggcggc
atcgcctacaacgccgaagaattcgaggtcatctgcaagcgcggcctggaagcctcgccc
accaacgaactgctgatcgaagaatcgctgctcggctggaaggagtacgagatggaagtg
gtccgcgacaaggcggacaactgcatcatcgtctgctccatcgaaaacctggacccgatg
ggcgtgcacaccggcgactccatcaccgtggcgcccgcgcagaccttgaccgacaaggaa
taccagatcctgcgcaacgcctcgctggccgtgttgcgcgagatcggcgtggacaccggc
ggctccaacgtgcagttctccatcaacccgaaggacggccgcatggtcgtcatcgagatg
aacccgcgggtctcgcgctcgtcggcgctggcctccaaggccaccggcttcccgatcgcc
aaggtggcagccaagctggcgatcggctacacgctcgacgaactgcgcaacgacatcacc
ggcggcgccacgccggcgtcgttcgagccgagcatcgactacgtcgtcaccaagatcccg
cgtttcgcgttcgagaagttccccaccgccgacagccgcctgacgacgcagatgaagtcc
gtcggcgaagtgatggccatgggccgcaccttccaggagtctttccagaaagccctgcgc
ggcctggaagtgggtgtggacggcatgaacgaaaagacccaggaccgcgaagtgctcgaa
aaggaactgggcgagcccggccccgagcgcatctggtacgtgggtgacgccttcgcccag
ggcatgagcgtggacgaggtcttcgcgctcaccaagatcgacccgtggttcctggtgcag
atcgaggagatcgtgaaaatcgagctcgaactcgaccagctcgccatcgacaagggtgac
gccgcactggcagcgctcgacgcgaccacgctgcgcacgctcaagtccaagggcttctcc
gaccgtcgcctggccaagctgctcaagaccagcgaaaaggcggtgcgcgaagcccgccgc
gcgctcaaggtgcgcccggtctacaagcgggtggacacctgcgcggcggagttcgctacc
aacaccgcctacatgtactccacgtacgaggacgagtgcgaggccgatccgaccgacaac
aagaagatcatggtgttgggcggtgggccgaaccgcatcggtcagggcatcgagttcgac
tactgctgcgtgcacgccgcgctggcgatgcgcgaggacggctacgagaccatcatggtc
aactgcaatcccgaaaccgtctccaccgactacgacacctccgaccgtctgtacttcgag
ccgctgacgctcgaggacgtgctggagatcgtcgacaaggaaaagccggtcggcgtgatc
gtgcagtacggcggccagacgccgctcaagctcgcgctcggcctggaagccgaaggcgtg
ccgatcatcggcaccacgcccgacatgatcgacgcggccgaagaccgtgagcgcttccag
aagctgctgcacgagctgggcctgcgccagccgcccaacgccaccgcgcgcaccgagccc
gaggccctggaaaaggccgcggcgctgggctatccgctggtggtgcgcccgagctacgtg
ctgggcggccgggcgatggaaatcgtccacgaacagcgtgacctggagcgctacatgcgc
gaagcggtcaaggtcagcaacgattccccggtgctgctcgaccgcttcctcaacgatgcc
atcgagtgcgacgtcgactgcatccgcgacaacaccggcgccaccttcatcggcggcgtg
atggagcatatcgagcaggccggcgtgcactcgggcgactcggcctgttcgctgccgccg
tactacctgtcggccgccacggtcgacgagctcaagcgtcagtcggccgcgatggccggc
gcgctgaacgtggtcggcctgatgaacgtgcagttcgcgatccaggaagtcgacgggcag
gacgtgatctacgtgctcgaagtcaatccgcgcgcatcccgcaccgtgcccttcgtcagc
aaggcgaccggcgtgcaactggccaaggtggccgcacgctgcatggccgggcaatcgctg
gcgtcgcagggcatcaccaaggaagtcacgccgccgtacttcagcgtcaaggaagccgtc
ttcccgttcgtcaagttcccgggcgtggacaccatcctcgggccggaaatgaagtcgacc
ggcgaggtcatgggcgtgggcaagaccttcggcgaagccttcgtcaagagccagctcggc
gccggcaccaagctgccgcgcgaaggcaaggtcttcctgacggtcaagaacaacgacaag
ccgcgcaccgtcgaagtggcgcgccagctggttcagctgggcttcagcctggtcgcgacc
aagggtacggccggggcgatctcggcggcgggcattccggtcgaggtggtcaacaaggtc
acagaaggccggccgcacgtggtcgacatgatcaagaacaacgagatcgtgatggtggtc
aacacggtcgaagagcgccgcaacgcgatctccgactcgcgccagatccgcacctcgtcg
ctgctggcccgtgtcactaccttcaccaccatctcgggcgccgaggcggcggtcgaaggc
ctggcgcatgtcgacggcctgggcgtgatctcggtgcaggaaatgcacgcgcaactcacg
gcctga
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