Xylophilus sp. GOD-11R: R9X41_09435
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Entry
R9X41_09435 CDS
T09600
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
xyg
Xylophilus sp. GOD-11R
Pathway
xyg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
xyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
R9X41_09435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xyg03400
]
R9X41_09435
DNA repair and recombination proteins [BR:
xyg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
R9X41_09435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
WPB58838
LinkDB
All DBs
Position
2004771..2005769
Genome browser
AA seq
332 aa
AA seq
DB search
MASVGSAPPSNRTVWKGAISFGLVHVPVGLYSATAASGIDFDWLDRRTMDPVGYKRINKK
TGKEIGSEDIVKGVDYGDGRYVILSTEEIEKAYPKITQTIEIEAFIDADEVPFVYLEKPY
YTAPINRGDKVYALLREALKRSNKVGVAKVVIATKQHLAVLIPCGPALVPNLLRWGGEIR
SMESLKLPPSDIKALGVRQAELDMALALIADMTQPWDADQFRNSFADEVMKLVEEKAQSG
EIHAVSRLDDSQPQNSGGAEVVDLTALLQRSLKRVAKTEPTQLSMVAPAPKAAAKTKAVP
VSAKKLAGKPSVAPKKAAAKSAQASKSTRKAA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtaggcagcgcgcccccgtcgaaccgcaccgtctggaaaggtgcgatcagt
ttcgggctggttcatgtgccggtcggcctctactcggccaccgccgcgagcggcatcgac
tttgactggctcgaccgccgcaccatggacccggttggctacaagcgcatcaacaagaaa
acaggaaaggaaatcgggtccgaggacatcgtgaaaggcgtcgattacggcgacggacgc
tacgtgattctgtcgaccgaagagatcgagaaggcctatcccaagatcacgcagacgatc
gagatagaagctttcatcgatgcggacgaggttccattcgtttatctggaaaagccgtac
tacaccgcgcccatcaatcgcggcgataaggtttatgccctgctgcgtgaggcgttgaaa
cgcagcaacaaggtcggcgtagccaaggtcgtcatcgctaccaagcaacatctcgcggtg
ctgattccctgtggtccggcgctggtgccgaacctgctgcgttggggcggtgagatccgg
tcgatggaatcgctgaagctgccgccgagcgacatcaaggctctgggcgtgcggcaggcc
gaactcgacatggcgctggccctgatcgccgacatgacgcaaccctgggacgcggatcag
tttcgaaattctttcgccgacgaggtcatgaagctggtcgaagaaaaagcgcagtcgggg
gagattcacgcggtgtcgcgtctcgacgacagccagccgcagaacagcggcggcgcggaa
gtggttgatctcaccgcgttgctgcaacgcagcttgaaacgggtcgccaagacggagccg
actcaattgagcatggtcgcacctgcaccgaaagccgccgcgaagaccaaggccgtgccg
gtctcggcaaagaagctggcgggtaaaccttcggtagcgcccaaaaaagcagcagcgaag
tcggcgcaggcgtccaaatcgacacgaaaagcggcatag
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