Xylophilus sp. GOD-11R: R9X41_11530
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Entry
R9X41_11530 CDS
T09600
Name
(GenBank) IclR family transcriptional regulator
KO
K20539
IclR family transcriptional regulator, blcABC operon repressor
Organism
xyg
Xylophilus sp. GOD-11R
Pathway
xyg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xyg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
R9X41_11530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xyg03000
]
R9X41_11530
Transcription factors [BR:
xyg03000
]
Prokaryotic type
Helix-turn-helix
IclR family
R9X41_11530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
Dimerisation
TrmB
DUF7343
DUF742
PaaX
DUF4423
Motif
Other DBs
NCBI-ProteinID:
WPB59233
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Position
2449961..2450794
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AA seq
277 aa
AA seq
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MPISQAKAASVSKSAGAESGPAEQVPAVVRSLAVLDLLSRQTGPISLARLTSELELPKSS
IRAICNTLASCGYVRRHADGSYRLSPKIVSLAETFLAGTDVTREFNSIWSDSKSDPEETV
LLSVLSGHEAVYLAVRNSVRPLGLAFRVGLKFPAWVSASGKAMLAYLPEQEARRIAGDGL
KSPKGLGSPKALERFIEELALTRQRGYSIDDQGIREGVYALGAPVFDAAGAVVAAVSVCV
SKLALEDHTAARHRDLTLGVARELTERLGGSVAPTGN
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcccatttcacaggcgaaagcagcgtccgtttcgaagtcagccggggcggaaagcgga
ccggccgaacaggttcctgcggtcgtgcgctccctggccgtactcgatctcctgagccgg
caaaccgggccgatcagcctcgcgcgcctgacctccgagctcgagcttcccaagagcagc
atccgggcgatatgcaacacgctggcctcgtgcggttacgtgcgccgccatgcggacgga
agttaccgcctcagcccgaagatcgtgagcttggcggagacgtttctcgcgggaaccgat
gtcacccgtgagttcaactcgatctggtcggacagcaagagcgaccccgaggagacggtt
ttgctgtcggtgctttccggccacgaagcggtctatctcgcggtgcgcaacagcgtgcgg
ccgttggggctggcgtttcgcgtgggcctcaagtttcctgcgtgggtttctgccagcggc
aaggccatgctggcctacctgccggagcaagaagcccgacggatcgccggagatggcctg
aaaagccccaaaggcctggggagccccaaggccctggagcgcttcatcgaagagttggcg
ctcacgcggcagcgcggctacagcatcgatgaccaggggatccgggaaggcgtctatgcg
ctcggtgcaccggtgttcgacgccgctggcgccgtggtcgcggcggtgtcggtgtgcgtg
agcaagctcgcgctggaagaccataccgcggctcgtcatcgggatctgaccctgggcgtt
gcccgcgaattgaccgaaagactgggcggctcggtcgccccgaccgggaattga
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