Xylophilus sp. GOD-11R: R9X41_17980
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Entry
R9X41_17980 CDS
T09600
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
xyg
Xylophilus sp. GOD-11R
Brite
KEGG Orthology (KO) [BR:
xyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xyg03009
]
R9X41_17980
Enzymes [BR:
xyg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
R9X41_17980
Ribosome biogenesis [BR:
xyg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
R9X41_17980
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Orexin
Cupin_3
Motif
Other DBs
NCBI-ProteinID:
WPB56017
LinkDB
All DBs
Position
complement(3872793..3873788)
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AA seq
331 aa
AA seq
DB search
MKDIIGGKTGASAAAVKIVVVDEESAGQRLDNFLLRHLKGVPKTHVYRIIRSGEVRVNKG
RASADTRVQAGDAVRLPPVRVSAEPDPETVRAVPPREFTVLHEDDFVLAIDKPAGTAVHG
GSGVSFGVIEQLRRARPQARFLELVHRLDRDTSGILLIAKRRSALTRLQDQFRERATDKT
YLALVSGAWPARLKVLDQPLRKFLLADGERRVRVTTPDDPDAMRAITLVKLRSTAPARPE
VGLPTLSLLEVTIKTGRTHQIRVHLSSAGHGIAGDDKYGDFDLNHRLQKAGLGRMFLHAW
RLQFDHPSTGERVALQADLPPELAAWEPTAP
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacattatagggggcaaaaccggggcatcggcggcggcggtgaaaatcgtcgtg
gtcgacgaggagtccgccggccagcgcctggacaacttcctgctgcgccatctgaaggga
gtgcccaagacccatgtctaccgcatcatccgcagcggcgaggtgcgggtgaacaaggga
cgcgcgtccgccgacacgcgggtgcaggccggcgacgcggtgcgcttgccgccggtgcgc
gtgtcggccgagccggacccggaaaccgtgcgcgcggtgccgccgcgcgaattcaccgtg
ctgcacgaagacgacttcgtgctggcgatcgacaagccggccggcacagcggtgcacggc
ggcagtggcgtcagcttcggtgtgatcgagcagttgcggcgtgcccggccgcaagcccgt
tttctagaactggtgcatcggctggatcgcgacacctcgggcatcctgctgatcgccaaa
cgccgctccgcgctgacgcggctgcaggaccagttccgagagcgcgccaccgacaagacc
tacctggccctggtcagcggcgcctggccggcgcggctgaaggtgctcgaccagccgctg
cgcaagttcctgctggccgacggcgagcgccgcgtgcgcgtgacgacgccggacgacccc
gacgccatgcgcgccatcacgctggtgaagctgcgctccaccgcgcccgcgcgaccggag
gtcggcctgccgacgctgagtctgctggaagtgacgatcaagaccgggcgcacgcaccag
atccgggtgcacctgtcgtcggcgggccacggtatcgcgggcgacgacaaatacggggac
ttcgatctgaaccatcggctgcagaaggccgggctcggccgcatgttcctgcacgcctgg
cggctgcagttcgatcatccgtcgaccggcgagcgggtcgcgctgcaggccgacctgccg
cccgagttggctgcgtgggaaccgacggcgccctga
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