Xylophilus sp. GOD-11R: R9X41_18680
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Entry
R9X41_18680 CDS
T09600
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
xyg
Xylophilus sp. GOD-11R
Brite
KEGG Orthology (KO) [BR:
xyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xyg03016
]
R9X41_18680 (miaB)
Enzymes [BR:
xyg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
R9X41_18680 (miaB)
Transfer RNA biogenesis [BR:
xyg03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
R9X41_18680 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
WPB56151
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All DBs
Position
4039781..4041157
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AA seq
458 aa
AA seq
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MASKKVFIKTFGCQMNEYDSDKMADVLGAAQGYEPTQDMEQADLILFNTCSVREKAQEKV
FSDLGRVKHLKARGVKIGVGGCVASQEGAAIIARAPYVDVVFGPQTLHRLPEMLAARDRL
DRPQVDISFPEIEKFDHLPPARVEGATAFVSIMEGCSKYCSYCVVPYTRGDEVSRPLDDV
LVEVAGLADQGVREVTLLGQNVNAYRGAMGDTAEICDFALLLEYVAEIPGIERIRYTTSH
PNEFTQRLIEAYDKVPQLVSHLHLPVQHGSDRILMAMKRGYTAMEYKSTVRKLRAVRPAL
SMSSDFIVGFPGETEEDFQKMMKLIRDVGFDNSFSFVFSPRPGTPAANLADDTPQSEKLR
RLQELQAVIDENTRAIGLSRVGTVQRILVEGPSKKSTAAAPELMGRTECNRVVNFQGPAR
LVGQMVDVRVTEVLGYSLRGAVVLAEPVDQGATAPVAA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaagaaagtattcatcaagaccttcggctgccagatgaacgagtacgactcg
gacaagatggccgacgtgctgggcgccgcccagggctacgaacccacgcaggacatggag
caggccgacctgatcctgttcaacacctgctcggtgcgcgagaaggcgcaggagaaagtg
ttctccgacctcggccgggtcaagcacctcaaggcacgcggcgtgaagatcggtgtcggc
ggctgcgtggccagccaggaaggcgcggccatcatcgcccgcgcaccctatgtcgacgtg
gtcttcggcccgcagacgctgcaccgcctgcccgagatgctcgccgcgcgcgaccgtctg
gaccggccgcaggtcgacatcagttttcccgagatcgagaagttcgaccacctgccgccg
gcccgcgtggaaggcgccaccgccttcgtgtccatcatggaaggctgctccaaatactgc
agctactgcgtggtgccctacacccgcggcgacgaggtgagccggccgctggacgacgtg
ctggtggaagtggcgggcctggccgaccagggcgtgcgcgaggtcacgctgctgggccag
aacgtcaacgcctaccggggcgcgatgggcgacaccgccgagatctgcgacttcgccctg
ctgctggaatacgtcgccgagattccgggcatcgaacgcatccgctacaccaccagccat
cccaacgaattcacccaacgcctgatcgaggcctacgacaaggtgccgcaactggtgagc
catctgcaccttccggtgcagcacggcagcgaccgcatcctgatggcgatgaagcgcggc
tacaccgccatggaatacaagagcacggtgcgcaagctgcgcgcggtgcggccggcgctg
tcgatgagcagcgacttcatcgtgggctttcccggcgagaccgaggaagacttccagaag
atgatgaagctgatccgcgacgtgggtttcgacaactcgttttccttcgtcttcagcccc
cgtccgggcacgccggcggccaatctggccgacgacacgccgcagtccgaaaaactgcgc
cggctgcaggagctgcaggccgtcatcgacgagaacacgcgcgccatcgggttgtcgcgc
gtgggcacggtgcagcgcattctggtcgaggggccgtccaagaaatcgaccgccgctgcg
cccgagctgatgggccgcaccgaatgcaaccgggtggtcaacttccagggaccggcgcgg
ctggtcggccagatggtcgacgtgcgggtgaccgaggtgctgggctattcgctgcgcggc
gcggtcgtgcttgccgaacccgttgaccagggcgcgacggcgccggtcgcggcatga
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