Xylophilus sp. GOD-11R: R9X41_18705
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Entry
R9X41_18705 CDS
T09600
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
xyg
Xylophilus sp. GOD-11R
Pathway
xyg02024
Quorum sensing
xyg03060
Protein export
xyg03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
xyg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
R9X41_18705 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
R9X41_18705 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
R9X41_18705 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
xyg02044
]
R9X41_18705 (ffh)
Enzymes [BR:
xyg01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
R9X41_18705 (ffh)
Secretion system [BR:
xyg02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
R9X41_18705 (ffh)
Eukaryotic Sec-SRP protein
R9X41_18705 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_22
APS_kinase
AAA_30
AAA_33
AAA_16
AAA_17
cobW
AAA_14
AAA_31
AAA_18
ResIII
Thymidylate_kin
nSTAND3
AAA_28
AAA_19
DO-GTPase1
TsaE
YqeC
T2SSE
AAA_24
FAD_binding_4
Helicase_RecD
ArsA_ATPase
GTP_EFTU
KTI12
Rad17
Motif
Other DBs
NCBI-ProteinID:
WPB56156
LinkDB
All DBs
Position
complement(4047005..4048402)
Genome browser
AA seq
465 aa
AA seq
DB search
MASALTDKLSRLVKEMRGQARITESNVQDMLREVRMALLEADVALPVVRDFIARVKEKAL
GAEVLGSLKPGQALVGIVNRELAATMGEGIADLNLAAQPPAVILMAGLQGAGKTTTTAKL
AKHLIEKRKKKVLTVSGDVYRPAAIEQLKTVTAQAGAEWFPSTPDQKPLDIARAAIDHAR
RHYFDVLLVDTAGRLAIDEALMREIRELHAELKPVETLFVVDAMQGQDAINTARAFKEAL
PLTGIVLTKLDGDSRGGAALSVRQITGAPIKFAGVSEKIDGLEVFDAERHAGRVLGMGDI
VALVEQVTAGVDMEAAQKLAAKVKSGDGFDLEDFLGQLRQMKQMGGLGSLMEKMPSELTA
KAGQVDMDKAEREVRRKEGIICSMTALERRKPELIKATRKRRIAAGAGVQVQDVNRLLNE
FGQMQTMMKKMKGGGLMKMMKRMGGMKGMGGMPGMPGLGGGKRPF
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgcactcaccgataagctctcccgactcgtcaaggaaatgcgtggccaggca
cgcatcaccgaatccaacgtgcaggacatgctgcgcgaggtgcgcatggccctgctcgag
gccgacgtggccctgccggtggtgcgcgacttcatcgcgcgcgtgaaggaaaaggcgctc
ggtgccgaggtgctcggctcgctcaagcccggccaggcgctggtcggcatcgtcaatcgc
gaactcgcggccaccatgggcgagggcatcgccgacctgaacctggccgcacagccgcca
gcggtgatcctgatggcgggcctgcaaggcgccggcaagaccaccaccaccgccaagctc
gccaagcacctgatcgaaaagcgcaagaagaaagtgctgaccgtgtccggcgacgtgtat
cgcccggccgccatcgagcaactcaagacggtgaccgcccaggccggcgccgaatggttc
cccagcacgcccgaccagaaaccgctggacatcgcgcgtgccgccatcgaccacgcccgt
cggcactatttcgacgtgctgctggtcgacaccgccggccgcctggcgatcgacgaagcg
ctgatgcgcgagatccgcgagctccacgccgagcttaagccggtcgaaacgcttttcgtc
gtcgacgcgatgcagggccaggacgcgatcaacaccgcgcgtgccttcaaggaagcgttg
ccgctgaccggcatcgtgctgaccaagctcgacggtgactcgcgcggtggcgcggcgctg
tcggtgcggcagatcaccggcgcgccgatcaaattcgccggcgtgtccgaaaagatcgac
ggcctggaagtgttcgacgccgagcgccatgccggccgggtgctgggcatgggcgacatc
gtggcgctggtcgagcaggtcaccgccggcgtcgacatggaggccgcgcagaaactggcc
gccaaggtcaagagcggcgacggcttcgacctggaagacttcctcggccagctgcgccag
atgaagcagatgggcggcctgggcagcctgatggaaaagatgcccagcgaactcaccgcg
aaggccggccaggtcgacatggacaaggccgagcgcgaggtgcgccgcaaggaaggcatc
atctgcagcatgaccgcactggagcgccgcaagcccgagctcatcaaggccacccgcaag
cgccgcatcgccgccggtgccggcgttcaggtgcaggacgtgaaccgcctgctcaacgag
ttcggccagatgcagaccatgatgaagaagatgaagggcggcggcctcatgaagatgatg
aagcgcatgggtggcatgaagggcatgggcggcatgccgggaatgccgggcctgggcggc
ggcaagcggcccttctga
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