Xylophilus sp. GOD-11R: R9X41_18725
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Entry
R9X41_18725 CDS
T09600
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
xyg
Xylophilus sp. GOD-11R
Pathway
xyg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
xyg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
R9X41_18725
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
xyg02022
]
R9X41_18725
02035 Bacterial motility proteins [BR:
xyg02035
]
R9X41_18725
Two-component system [BR:
xyg02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
R9X41_18725
Bacterial motility proteins [BR:
xyg02035
]
Pilus system
Twitching motility proteins
R9X41_18725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_28
HTH_23
AAA
HTH_30
AAA_16
AAA_2
HTH_50
AAA_7
wHTH-HSP90_Na-assoc
Motif
Other DBs
NCBI-ProteinID:
WPB56160
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Position
4051244..4052755
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AA seq
503 aa
AA seq
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MTATPRATAQADTTILVIDDEPDLRTLYELTLLREGYRVAAAGTLAEAHDLLQLHRYGAV
ITDMRLPDGSGLEVLNLLRTGGRAERCVVMTAYGSAENAVEALKAGAFDYLTKPVDLRQF
RTVVAAAVQTGAAGQVAAPHPPAPAAGGAIAPRAAPAPSGAAASALARMVGDSAAMQAVR
QRIAKVARTMAPVLIRGESGTGKELVARALHASSHRASGPMVAVNCSAIPENLLESEFFG
ARKGAYTGAAADREGYFQAARGGTLFLDEIGDLPLAMQSKLLRAIQERCVRPVGSAQEDM
IDVRIVSATHRDLAADVRAGGFRQDLYYRLNVIEVVVPPLRERREDLPQLAAALLERISR
ESGLPAPQLTPQSLERLRSLPLAGNVRELENLLHRAVALSDGDTLELETAVEYQGEPIEA
ESTGTEGPLAAKAPVPMPDDLQAYLDAREREILVKALAENRFNRTAAAAQLGISLRQIRY
RIARLGIAGPRDSQENDGGADED
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
gtgacagccacaccgcgcgccaccgcccaggcggacaccaccatcctcgtcatcgacgac
gagccggatctgcgcacgctctacgagctgacgctgctgcgcgagggctaccgggtggcc
gccgccggcacgttggccgaagcccacgatctgctgcagctgcaccgctacggcgccgtc
atcaccgacatgcggctgcccgacggctccggactcgaagtgctcaacctgctgcgcacc
ggcggccgggccgagcgctgcgtcgtcatgaccgcctacggctcggccgagaacgcggtc
gaggccctgaaggccggcgctttcgactacctcaccaagccggtcgacctgcggcagttc
cgcaccgtggtcgccgccgccgtgcagaccggtgcggccggacaggtcgcggcaccgcat
ccgcccgcgccggctgcgggtggcgcgattgcgccgcgggccgcgcccgcccccagtggc
gccgccgccagcgcgctcgcccgcatggtcggcgactccgccgccatgcaggcggtgcgc
cagcgcatcgccaaggtcgcgcgcaccatggcgccggtgctgatccggggcgaatcgggc
accggcaaggaactcgtcgcccgcgctctgcacgccagcagccaccgtgcgtccggcccg
atggtggcggtgaactgcagcgccattcccgagaacctgctcgagagcgaattcttcggc
gcgcgcaagggtgcctacaccggcgccgcggccgaccgggaaggctatttccaggcggcg
cgcggcggcaccctgttcctcgacgagatcggcgacctgccgctggcgatgcagtccaag
ctgctgcgcgccatccaggagcgctgcgtgcggccggtcggctccgcgcaggaagacatg
atcgatgtgcgcatcgtcagcgccacccaccgcgacctggccgccgacgtgcgggcgggc
ggtttccggcaagacctctactaccggctcaacgtgatcgaggtcgtggtgccgccgctg
cgcgagcggcgcgaagacctgccccagctcgccgcagcgctgctggagcgcatctcgcgc
gaatcgggcctgccggcgccgcagctcacgccgcaatcgctggagcggctgcgcagcctg
ccgctggccggcaacgtgcgcgagctggagaacctgctgcaccgcgcggtggcgctgagc
gacggcgacacgctggaactcgaaaccgcggtcgaataccagggcgagccgatcgaagcc
gaatcgaccggcaccgaaggtcctctcgccgccaaggcgcccgtgccgatgcccgacgac
ctgcaagcctacctggacgcacgcgaacgcgagattctggtcaaggccctggccgaaaac
cgcttcaaccgcaccgccgccgccgcccagctcggcatcagcctgcgccagatccgctac
cgcatcgcgcggctcggcatcgccggcccgcgcgactcgcaggaaaacgatggcggagcc
gacgaggactga
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